Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.62□□□□□ -1.35
C9orf40Q8IXQ3 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AL356361.1-201ENST00000400943 1459 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AC011447.6-201ENST00000623510 2598 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 FAM204BP-201ENST00000369171 701 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AC074375.1-201ENST00000372993 192 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 MIR152-201ENST00000385212 87 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AC006511.2-201ENST00000388966 660 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 RNA5SP35-201ENST00000391257 129 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 RN7SKP254-201ENST00000410685 310 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 UQCRHP1-204ENST00000424609 274 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 OR52S1P-201ENST00000427016 937 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 RN7SL149P-201ENST00000465197 281 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 TECRP2-201ENST00000503270 928 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 RNA5SP518-201ENST00000515957 119 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AL353807.4-201ENST00000604995 257 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AC104184.1-201ENST00000607513 721 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AL121782.1-201ENST00000611242 413 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AL031777.2-201ENST00000611953 196 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 MIR8089-201ENST00000620165 82 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AL121985.3-201ENST00000620690 523 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AC127071.1-201ENST00000624997 712 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 AC011379.1-201ENST00000508713 3025 ntBASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
C9orf40Q8IXQ3 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 RBBP4P4-201ENST00000398588 1289 ntBASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AC024937.2-201ENST00000411669 1242 ntBASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AL662791.3-201ENST00000413771 776 ntBASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AL161742.1-201ENST00000418154 584 ntBASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AL158214.1-201ENST00000444423 404 ntBASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 MED28P7-201ENST00000456611 530 ntBASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 RPSAP48-201ENST00000466509 889 ntBASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 RPL23AP8-201ENST00000479812 475 ntBASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 RPL7AP30-201ENST00000482859 796 ntBASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AF305872.1-201ENST00000485217 471 ntBASIC6.6□□□□□ -1.35
C9orf40Q8IXQ3 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms