Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AP001002.1-201ENST00000625148 1513 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 DDX50P1-201ENST00000438163 2400 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
SUMO3P55854 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
SUMO3P55854 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.79□□□□□ -1.32
SUMO3P55854 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC6.78□□□□□ -1.32
SUMO3P55854 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 AC131649.2-201ENST00000624925 4439 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.78□□□□□ -1.32
SUMO3P55854 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SUMO3P55854 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.78□□□□□ -1.32
SUMO3P55854 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SUMO3P55854 PTMAP8-201ENST00000397729 342 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 VN1R66P-201ENST00000412929 916 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 OR7E36P-201ENST00000419933 954 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 EEF1GP7-201ENST00000422983 703 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 RPL6P2-201ENST00000425480 783 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AC009299.1-201ENST00000429684 717 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 DNAJA1P6-201ENST00000437347 354 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.78□□□□□ -1.32
SUMO3P55854 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC6.78□□□□□ -1.32
SUMO3P55854 TXNP2-201ENST00000443918 295 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SUMO3P55854 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.78□□□□□ -1.32
SUMO3P55854 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 NUCKS1P1-201ENST00000452067 703 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.78□□□□□ -1.32
SUMO3P55854 AC013429.1-201ENST00000456604 422 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 RPL7P17-201ENST00000470927 724 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 RN7SL815P-201ENST00000470970 290 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.78□□□□□ -1.32
SUMO3P55854 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.78□□□□□ -1.32
SUMO3P55854 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.78□□□□□ -1.32
SUMO3P55854 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.78□□□□□ -1.32
SUMO3P55854 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.78□□□□□ -1.32
SUMO3P55854 OR6M3P-201ENST00000531567 700 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AC074029.2-201ENST00000551045 634 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 COX6CP11-201ENST00000555293 229 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.78□□□□□ -1.32
SUMO3P55854 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.78□□□□□ -1.32
SUMO3P55854 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.78□□□□□ -1.32
SUMO3P55854 RN7SL835P-201ENST00000579920 262 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 AP001120.4-201ENST00000590231 108 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.78□□□□□ -1.32
SUMO3P55854 AL390058.1-201ENST00000603834 629 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AL109936.2-201ENST00000605350 650 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 PPATP2-201ENST00000605635 508 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AC097381.3-201ENST00000608962 462 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AC023310.4-201ENST00000613130 650 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AL445649.1-201ENST00000615941 691 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 PART1_3.1-201ENST00000619680 131 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 MIR6807-201ENST00000621968 92 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 AC106795.5-201ENST00000623288 454 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 LINC00216-201ENST00000623548 1126 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.78□□□□□ -1.32
SUMO3P55854 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 AP003471.1-202ENST00000319051 1988 ntBASIC6.78□□□□□ -1.32
SUMO3P55854 ST7-213ENST00000432298 1956 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.78□□□□□ -1.32
SUMO3P55854 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SUMO3P55854 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SUMO3P55854 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SUMO3P55854 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.77□□□□□ -1.32
SUMO3P55854 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.77□□□□□ -1.32
SUMO3P55854 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.77□□□□□ -1.32
SUMO3P55854 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.77□□□□□ -1.32
SUMO3P55854 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SUMO3P55854 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms