Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC6.49□□□□□ -1.37
FREM3P0C091 AC092111.1-201ENST00000618256 3358 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FREM3P0C091 AL359396.1-201ENST00000623151 2376 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.49□□□□□ -1.37
FREM3P0C091 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
FREM3P0C091 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FREM3P0C091 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
FREM3P0C091 SNORA68-201ENST00000384437 133 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
FREM3P0C091 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
FREM3P0C091 CNN3P1-201ENST00000401596 935 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 EEF1GP6-201ENST00000402309 905 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.49□□□□□ -1.37
FREM3P0C091 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.49□□□□□ -1.37
FREM3P0C091 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.49□□□□□ -1.37
FREM3P0C091 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC6.49□□□□□ -1.37
FREM3P0C091 RPS14P7-201ENST00000473701 448 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.49□□□□□ -1.37
FREM3P0C091 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
FREM3P0C091 AC112225.1-201ENST00000508230 297 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC6.49□□□□□ -1.37
FREM3P0C091 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.49□□□□□ -1.37
FREM3P0C091 HMGN1P26-201ENST00000558737 303 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 AL035422.2-201ENST00000603059 565 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 AC245407.2-201ENST00000614199 451 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC6.49□□□□□ -1.37
FREM3P0C091 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.49□□□□□ -1.37
FREM3P0C091 AC006453.3-201ENST00000635891 377 ntBASIC6.49□□□□□ -1.37
FREM3P0C091 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FREM3P0C091 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FREM3P0C091 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
FREM3P0C091 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
FREM3P0C091 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.48□□□□□ -1.37
FREM3P0C091 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.48□□□□□ -1.37
FREM3P0C091 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.48□□□□□ -1.37
FREM3P0C091 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
FREM3P0C091 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.48□□□□□ -1.37
FREM3P0C091 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
FREM3P0C091 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC6.48□□□□□ -1.37
FREM3P0C091 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC6.48□□□□□ -1.37
FREM3P0C091 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 AC093616.1-201ENST00000427434 2095 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
FREM3P0C091 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 BTK-202ENST00000372880 2248 ntTSL 2 BASIC6.48□□□□□ -1.37
FREM3P0C091 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 ARSFP1-201ENST00000398758 477 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 NPM1P30-201ENST00000425092 828 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 BX119917.1-201ENST00000432517 502 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 RPL3P11-201ENST00000434028 1146 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 RPS16P9-201ENST00000477220 427 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.48□□□□□ -1.37
FREM3P0C091 AC137549.1-201ENST00000514243 533 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.48□□□□□ -1.37
FREM3P0C091 IGLJCOR18-201ENST00000584002 424 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.48□□□□□ -1.37
FREM3P0C091 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC6.48□□□□□ -1.37
FREM3P0C091 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 UGT2B25P-201ENST00000511504 1586 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.48□□□□□ -1.37
FREM3P0C091 SPATA31C1-201ENST00000420021 3895 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 DDX43P1-201ENST00000510713 1763 ntBASIC6.48□□□□□ -1.37
FREM3P0C091 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
FREM3P0C091 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.48□□□□□ -1.37
FREM3P0C091 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
FREM3P0C091 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
FREM3P0C091 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.48□□□□□ -1.37
FREM3P0C091 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FREM3P0C091 AL512329.1-201ENST00000404600 1592 ntBASIC6.47□□□□□ -1.37
FREM3P0C091 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FREM3P0C091 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
FREM3P0C091 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FREM3P0C091 AP002800.1-201ENST00000624982 2225 ntBASIC6.47□□□□□ -1.37
FREM3P0C091 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FREM3P0C091 MIR99A-201ENST00000384906 81 ntBASIC6.47□□□□□ -1.37
FREM3P0C091 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
FREM3P0C091 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
FREM3P0C091 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC6.47□□□□□ -1.37
FREM3P0C091 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.47□□□□□ -1.37
FREM3P0C091 OR7E7P-201ENST00000455678 1012 ntBASIC6.47□□□□□ -1.37
FREM3P0C091 VN1R6P-201ENST00000458417 907 ntBASIC6.47□□□□□ -1.37
FREM3P0C091 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.47□□□□□ -1.37
FREM3P0C091 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FREM3P0C091 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
FREM3P0C091 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms