Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNA5SP378-201ENST00000363646 120 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 Y_RNA.248-201ENST00000364501 109 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 Y_RNA.517-201ENST00000384551 106 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AL109918.1-202ENST00000406724 436 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 CNOT7P2-201ENST00000441051 832 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC020779.1-201ENST00000478757 796 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 PANCR-201ENST00000503456 493 ntTSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC112203.1-201ENST00000506315 1020 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC022400.4-201ENST00000604613 286 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC015849.6-201ENST00000605454 474 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC007349.4-201ENST00000608114 532 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC138749.5-201ENST00000611461 208 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC007204.2-201ENST00000615022 616 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 LINC00216-201ENST00000623548 1126 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC106782.7-201ENST00000624024 418 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC133555.5-201ENST00000624430 418 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC110769.3-201ENST00000624567 1173 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC024475.4-201ENST00000635144 1206 ntTSL 5 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 TMTC4-202ENST00000342624 3602 ntTSL 2 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC9.36□□□□□ -0.91
ALDH1A1P00352 CYCS-201ENST00000305786 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
ALDH1A1P00352 AC114689.1-201ENST00000578727 2484 ntBASIC9.36□□□□□ -0.91
ALDH1A1P00352 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 CALCOCO1-210ENST00000548263 3888 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 FAM204BP-201ENST00000369171 701 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 SNORA51.7-201ENST00000384171 134 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 RNU6-636P-201ENST00000384598 107 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 RALGDS-204ENST00000393157 3689 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 SNORA11.5-201ENST00000408163 128 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 RN7SKP30-201ENST00000411373 334 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 LINC00423-201ENST00000421002 903 ntTSL 5 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 IPMKP1-201ENST00000425988 855 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 OR2B8P-201ENST00000432841 938 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC9.35□□□□□ -0.91
ALDH1A1P00352 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
ALDH1A1P00352 AL596276.1-201ENST00000434465 418 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 ELOCP8-201ENST00000439309 332 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 ELOCP15-201ENST00000442090 332 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 SNRPEP8-201ENST00000442866 260 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 CDC42P2-201ENST00000448566 569 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 OR52E7P-201ENST00000452394 933 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 TREML3P-201ENST00000457327 501 ntBASIC9.35□□□□□ -0.91
ALDH1A1P00352 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms