Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.63□□□□□ -1.35
SSX4O60224 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 GAS2-210ENST00000630668 674 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SSX4O60224 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
SSX4O60224 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
SSX4O60224 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 AP000766.1-201ENST00000561746 4140 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC106872.6-201ENST00000514228 1346 ntBASIC6.62□□□□□ -1.35
SSX4O60224 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 RNU1-16P-201ENST00000365477 164 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC074375.1-201ENST00000372993 192 ntBASIC6.62□□□□□ -1.35
SSX4O60224 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 HMGB3P1-201ENST00000393368 573 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.62□□□□□ -1.35
SSX4O60224 RPL34P19-201ENST00000415903 342 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 GAPDHP55-201ENST00000423136 803 ntBASIC6.62□□□□□ -1.35
SSX4O60224 PPIL1P1-201ENST00000423936 499 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC009303.1-201ENST00000426307 352 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX4O60224 MED28P8-201ENST00000454831 521 ntBASIC6.62□□□□□ -1.35
SSX4O60224 RN7SL58P-201ENST00000473445 294 ntBASIC6.62□□□□□ -1.35
SSX4O60224 RN7SL182P-201ENST00000496499 300 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.62□□□□□ -1.35
SSX4O60224 AC106800.2-201ENST00000514009 1103 ntBASIC6.62□□□□□ -1.35
SSX4O60224 CAPSL-204ENST00000514524 656 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 RNA5SP75-201ENST00000516841 111 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX4O60224 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 OR7E2P-201ENST00000533071 889 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC6.62□□□□□ -1.35
SSX4O60224 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX4O60224 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 COX4I1P1-201ENST00000554239 509 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX4O60224 MIR3137-201ENST00000577367 75 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC6.62□□□□□ -1.35
SSX4O60224 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 AC099777.1-201ENST00000603779 1070 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AL021918.1-201ENST00000603933 236 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC020765.1-201ENST00000604296 328 ntBASIC6.62□□□□□ -1.35
SSX4O60224 CYCSP1-201ENST00000604815 315 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AL513218.1-201ENST00000606527 391 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC012488.1-201ENST00000611221 640 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC023310.4-201ENST00000613130 650 ntBASIC6.62□□□□□ -1.35
SSX4O60224 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.62□□□□□ -1.35
SSX4O60224 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 AL596275.2-208ENST00000641192 594 ntBASIC6.62□□□□□ -1.35
SSX4O60224 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 AC015871.3-201ENST00000618835 2261 ntBASIC6.62□□□□□ -1.35
SSX4O60224 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SSX4O60224 PABPC1P8-201ENST00000452851 2086 ntBASIC6.62□□□□□ -1.35
SSX4O60224 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.62□□□□□ -1.35
SSX4O60224 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SSX4O60224 WBP11P1-201ENST00000562560 1931 ntBASIC6.62□□□□□ -1.35
SSX4O60224 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms