Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 TRBV7-5-201ENST00000390382 345 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 NUS1P4-201ENST00000401550 585 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 PTP4A1P1-201ENST00000420539 515 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 DUTP4-201ENST00000424782 475 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 NEFLP1-201ENST00000436364 984 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 MTND6P32-201ENST00000457611 483 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 RPL23P10-201ENST00000468780 412 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 FTH1P8-201ENST00000498161 514 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 OR10J9P-201ENST00000511932 987 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 RN7SKP190-201ENST00000516079 286 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 TCEA1-206ENST00000520534 635 ntTSL 2 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC092368.2-201ENST00000565911 600 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC015818.6-201ENST00000584274 634 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AL645949.1-202ENST00000600073 242 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AP000962.1-201ENST00000602654 729 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 MIR4435-2HG-217ENST00000604981 759 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
HMGB1P1B2RPK0 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 ASNSP6-201ENST00000592770 1618 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 RNA5SP161-201ENST00000363871 115 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 RNA5SP149-201ENST00000364952 92 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AL353625.1-202ENST00000366273 571 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AL139327.1-201ENST00000382988 348 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AL590762.1-201ENST00000391782 432 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 CAV2-203ENST00000393480 1179 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 MTCO1P51-201ENST00000427672 1060 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 BX005266.3-201ENST00000443013 1075 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 SS18L2P1-201ENST00000445923 213 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AC239798.1-201ENST00000449024 1176 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 MYL6P1-201ENST00000449877 453 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 RPL18AP2-201ENST00000450007 482 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 RBMY2TP-201ENST00000451162 947 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AC019084.1-201ENST00000457337 432 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AC040975.1-201ENST00000472104 316 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 RPS4XP23-201ENST00000487801 237 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AC027338.2-201ENST00000504382 526 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 ELL2P2-201ENST00000515135 694 ntBASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
HMGB1P1B2RPK0 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 224.9 ms