Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MRPS28-207ENST00000521434 585 ntTSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC074032.1-202ENST00000552815 467 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 IGHV1OR15-4-201ENST00000560037 348 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 IGHV1OR15-3-201ENST00000564926 351 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 RN7SL178P-201ENST00000582930 304 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 ANKRD20A19P-203ENST00000602724 295 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC097381.3-201ENST00000608962 462 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 KHDC1-206ENST00000610330 632 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 IGKV1OR1-1-201ENST00000613775 347 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 MIAT_exon1.1-201ENST00000617016 135 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC134981.1-201ENST00000628076 348 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AL627309.5-203ENST00000466557 1301 ntTSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 TRHR-201ENST00000311762 1415 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 AC110597.1-201ENST00000562669 3176 ntBASIC5.39□□□□□ -1.55
AP1S3Q96PC3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.39□□□□□ -1.55
AP1S3Q96PC3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 API5P1-201ENST00000424316 1510 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC069222.1-201ENST00000608028 3360 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 SPIN2B-201ENST00000275988 1152 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 CRYGA-201ENST00000304502 609 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 RN7SKP72-201ENST00000362327 292 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 RNA5SP161-201ENST00000363871 115 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 RNA5SP149-201ENST00000364952 92 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 NRIR-201ENST00000366140 799 ntTSL 3 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 UQCRHP2-201ENST00000415651 288 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 RPSAP2-201ENST00000416785 888 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 SAP18P3-201ENST00000449663 396 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 NUCKS1P1-201ENST00000452067 703 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC090680.1-201ENST00000464696 860 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 MRPL49P1-201ENST00000505951 535 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC006499.1-201ENST00000511870 850 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 GS1-279B7.1-201ENST00000562817 399 ntTSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 MIR3137-201ENST00000577367 75 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC004918.3-201ENST00000602609 925 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AP1S3Q96PC3 AC123788.2-201ENST00000612290 283 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 MIR6745-201ENST00000612694 127 ntBASIC5.38□□□□□ -1.55
AP1S3Q96PC3 CRYAB-216ENST00000616970 977 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms