Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AL390879.2-203ENST00000426943 1121 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 VN1R53P-201ENST00000429536 957 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC114878.1-201ENST00000441166 358 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 EFCAB14P1-201ENST00000442409 463 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC239860.1-201ENST00000444680 1270 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 RN7SL180P-201ENST00000466769 294 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 CREM-224ENST00000468236 582 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 RN7SL36P-201ENST00000469345 276 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 RN7SL861P-201ENST00000473793 285 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 CREM-234ENST00000484283 660 ntTSL 5 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC106760.2-201ENST00000504159 619 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC055733.3-201ENST00000505214 523 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 LINC02200-203ENST00000513687 541 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 SAA3P-201ENST00000533267 365 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 NDFIP1P1-201ENST00000543144 525 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC233290.1-201ENST00000553021 1186 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 RBM22P13-201ENST00000569805 1244 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC020910.4-201ENST00000612269 540 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC104307.1-201ENST00000616142 196 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AL359742.1-201ENST00000622497 540 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AL590065.1-201ENST00000603371 4774 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AL133320.1-201ENST00000621423 2352 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 CREM-218ENST00000460270 1416 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 KATNBL1P2-201ENST00000433311 835 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 RPS21P1-201ENST00000434479 247 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 MTND4P15-201ENST00000437913 1033 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 LINC02474-202ENST00000441160 1148 ntTSL 5 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 GXYLT1P1-201ENST00000446657 490 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AL590004.3-201ENST00000450255 443 ntTSL 5 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 RN7SL335P-201ENST00000482790 304 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC018639.1-201ENST00000492994 442 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC107956.2-201ENST00000496042 454 ntBASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.95□□□□□ -1.3
AMBRA1Q9C0C7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms