Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 OR4C1P-202ENST00000641065 1569 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 RN7SKP63-201ENST00000363187 301 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC240504.1-201ENST00000395709 845 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 RN7SKP131-201ENST00000410698 301 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 MTND4LP21-201ENST00000415303 295 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AL593856.1-201ENST00000419949 805 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 EEF1GP7-201ENST00000422983 703 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 GAPDHP73-201ENST00000423411 1007 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC040975.1-201ENST00000472104 316 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC117392.1-201ENST00000487061 596 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC127024.1-201ENST00000490847 418 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 ADI1P2-201ENST00000514945 429 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC025857.1-201ENST00000525252 377 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 OR7E2P-201ENST00000533071 889 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 CUX2P1-201ENST00000606426 298 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC135050.6-202ENST00000613584 392 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AL353898.2-201ENST00000623000 255 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 TRIM60P14-201ENST00000513444 1419 ntBASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LINC00346Q8IVM7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 AL357556.1-201ENST00000421884 1388 ntBASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 RPL5P5-201ENST00000392009 893 ntBASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 AC231533.2-201ENST00000419045 978 ntBASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 RPL5P34-201ENST00000426545 891 ntBASIC6.48□□□□□ -1.37
LINC00346Q8IVM7 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 345.1 ms