Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC5□□□□□ -1.61
RPL39P62891 SMG7-216ENST00000638826 219 ntTSL 2 BASIC5□□□□□ -1.61
RPL39P62891 MFSD8-234ENST00000641503 1082 ntBASIC5□□□□□ -1.61
RPL39P62891 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5□□□□□ -1.61
RPL39P62891 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RPL39P62891 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC5□□□□□ -1.61
RPL39P62891 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 AP005139.1-201ENST00000580702 1647 ntBASIC5□□□□□ -1.61
RPL39P62891 AC105114.1-201ENST00000624795 1862 ntBASIC5□□□□□ -1.61
RPL39P62891 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
RPL39P62891 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RPL39P62891 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RPL39P62891 CREM-216ENST00000429130 1476 ntTSL 5 BASIC5□□□□□ -1.61
RPL39P62891 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5□□□□□ -1.61
RPL39P62891 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RPL39P62891 CDY5P-201ENST00000411487 1580 ntBASIC4.99□□□□□ -1.61
RPL39P62891 CDY9P-201ENST00000451397 1580 ntBASIC4.99□□□□□ -1.61
RPL39P62891 SAMMSON-203ENST00000641005 2168 ntBASIC4.99□□□□□ -1.61
RPL39P62891 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RPL39P62891 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC4.99□□□□□ -1.61
RPL39P62891 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC4.99□□□□□ -1.61
RPL39P62891 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 KYNUP1-201ENST00000466683 1406 ntBASIC4.99□□□□□ -1.61
RPL39P62891 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 RNA5SP263-201ENST00000363376 128 ntBASIC4.99□□□□□ -1.61
RPL39P62891 RNA5SP512-201ENST00000364550 120 ntBASIC4.99□□□□□ -1.61
RPL39P62891 RNA5SP79-201ENST00000365193 109 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RPL39P62891 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC4.99□□□□□ -1.61
RPL39P62891 CRIP1P3-201ENST00000416794 220 ntBASIC4.99□□□□□ -1.61
RPL39P62891 GNAI2P2-201ENST00000417003 916 ntBASIC4.99□□□□□ -1.61
RPL39P62891 RPL7AP72-201ENST00000417266 768 ntBASIC4.99□□□□□ -1.61
RPL39P62891 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC4.99□□□□□ -1.61
RPL39P62891 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC4.99□□□□□ -1.61
RPL39P62891 RPL5P27-201ENST00000437011 881 ntBASIC4.99□□□□□ -1.61
RPL39P62891 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC4.99□□□□□ -1.61
RPL39P62891 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC4.99□□□□□ -1.61
RPL39P62891 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC4.99□□□□□ -1.61
RPL39P62891 AL021939.1-201ENST00000441868 886 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC4.99□□□□□ -1.61
RPL39P62891 CDC42P2-201ENST00000448566 569 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC4.99□□□□□ -1.61
RPL39P62891 AC007000.1-201ENST00000453064 794 ntBASIC4.99□□□□□ -1.61
RPL39P62891 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 AC135721.2-201ENST00000464237 300 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC117382.1-201ENST00000468074 730 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC068522.1-201ENST00000482895 345 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC4.99□□□□□ -1.61
RPL39P62891 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC4.99□□□□□ -1.61
RPL39P62891 GAPDHP31-201ENST00000509325 1014 ntBASIC4.99□□□□□ -1.61
RPL39P62891 OR7E83P-201ENST00000511021 970 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC4.99□□□□□ -1.61
RPL39P62891 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 OR7E154P-201ENST00000525174 932 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC4.99□□□□□ -1.61
RPL39P62891 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 AC016144.1-201ENST00000548175 1087 ntBASIC4.99□□□□□ -1.61
RPL39P62891 SRMP2-201ENST00000553832 916 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC4.99□□□□□ -1.61
RPL39P62891 DNM1P31-201ENST00000564149 696 ntBASIC4.99□□□□□ -1.61
RPL39P62891 TUBAP4-201ENST00000569261 416 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC009171.1-201ENST00000572673 266 ntBASIC4.99□□□□□ -1.61
RPL39P62891 MIR4793-201ENST00000577502 87 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC4.99□□□□□ -1.61
RPL39P62891 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC4.99□□□□□ -1.61
RPL39P62891 AC129492.5-201ENST00000603489 315 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AC211469.1-201ENST00000604263 394 ntBASIC4.99□□□□□ -1.61
RPL39P62891 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC4.99□□□□□ -1.61
RPL39P62891 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 uc_338.21-201ENST00000622458 147 ntBASIC4.99□□□□□ -1.61
RPL39P62891 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC4.99□□□□□ -1.61
RPL39P62891 METAP1-212ENST00000625963 147 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 CR589904.1-203ENST00000636515 318 ntBASIC4.99□□□□□ -1.61
RPL39P62891 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 AL357556.1-201ENST00000421884 1388 ntBASIC4.99□□□□□ -1.61
RPL39P62891 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms