Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RPSAP44-201ENST00000406712 884 ntBASIC7.67□□□□□ -1.18
NEK3P51956 RPSAP72-201ENST00000407020 358 ntBASIC7.67□□□□□ -1.18
NEK3P51956 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC7.67□□□□□ -1.18
NEK3P51956 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 GAPDHP51-201ENST00000426454 1000 ntBASIC7.67□□□□□ -1.18
NEK3P51956 RNF11P2-201ENST00000427702 440 ntBASIC7.67□□□□□ -1.18
NEK3P51956 AL137220.1-201ENST00000431369 661 ntTSL 2 BASIC7.67□□□□□ -1.18
NEK3P51956 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.67□□□□□ -1.18
NEK3P51956 CR391992.1-201ENST00000438601 394 ntBASIC7.67□□□□□ -1.18
NEK3P51956 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.67□□□□□ -1.18
NEK3P51956 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.67□□□□□ -1.18
NEK3P51956 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC7.67□□□□□ -1.18
NEK3P51956 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.67□□□□□ -1.18
NEK3P51956 AC097263.1-201ENST00000496795 606 ntBASIC7.67□□□□□ -1.18
NEK3P51956 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.67□□□□□ -1.18
NEK3P51956 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC7.67□□□□□ -1.18
NEK3P51956 AC013283.1-201ENST00000557282 492 ntBASIC7.67□□□□□ -1.18
NEK3P51956 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.67□□□□□ -1.18
NEK3P51956 AC007136.1-201ENST00000589141 199 ntBASIC7.67□□□□□ -1.18
NEK3P51956 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC7.67□□□□□ -1.18
NEK3P51956 AC245128.3-201ENST00000594721 748 ntBASIC7.67□□□□□ -1.18
NEK3P51956 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 AL451085.1-201ENST00000604546 690 ntBASIC7.67□□□□□ -1.18
NEK3P51956 CR382285.1-202ENST00000604687 547 ntBASIC7.67□□□□□ -1.18
NEK3P51956 AC007204.1-201ENST00000621794 555 ntBASIC7.67□□□□□ -1.18
NEK3P51956 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.67□□□□□ -1.18
NEK3P51956 TMEM14EP-202ENST00000639378 1296 ntBASIC7.67□□□□□ -1.18
NEK3P51956 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC7.67□□□□□ -1.18
NEK3P51956 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 MFSD8-218ENST00000641186 4448 ntBASIC7.67□□□□□ -1.18
NEK3P51956 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 AL589993.1-201ENST00000407450 2524 ntBASIC7.67□□□□□ -1.18
NEK3P51956 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
NEK3P51956 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
NEK3P51956 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.66□□□□□ -1.18
NEK3P51956 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
NEK3P51956 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.66□□□□□ -1.18
NEK3P51956 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 GTF2IP1-202ENST00000614592 2047 ntBASIC7.66□□□□□ -1.18
NEK3P51956 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
NEK3P51956 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 Y_RNA.62-201ENST00000362840 99 ntBASIC7.66□□□□□ -1.18
NEK3P51956 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC7.66□□□□□ -1.18
NEK3P51956 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.66□□□□□ -1.18
NEK3P51956 FECHP1-201ENST00000431896 1214 ntBASIC7.66□□□□□ -1.18
NEK3P51956 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.66□□□□□ -1.18
NEK3P51956 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 AC114928.1-201ENST00000446516 415 ntBASIC7.66□□□□□ -1.18
NEK3P51956 AL591379.2-201ENST00000450223 397 ntBASIC7.66□□□□□ -1.18
NEK3P51956 TDGF1P6-201ENST00000463873 448 ntBASIC7.66□□□□□ -1.18
NEK3P51956 AC018475.1-201ENST00000478358 465 ntBASIC7.66□□□□□ -1.18
NEK3P51956 RN7SL182P-201ENST00000496499 300 ntBASIC7.66□□□□□ -1.18
NEK3P51956 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.66□□□□□ -1.18
NEK3P51956 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC7.66□□□□□ -1.18
NEK3P51956 RNU6-943P-201ENST00000516960 98 ntBASIC7.66□□□□□ -1.18
NEK3P51956 AC090539.2-201ENST00000523425 671 ntBASIC7.66□□□□□ -1.18
NEK3P51956 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.66□□□□□ -1.18
NEK3P51956 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
NEK3P51956 COX6CP11-201ENST00000555293 229 ntBASIC7.66□□□□□ -1.18
NEK3P51956 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC7.66□□□□□ -1.18
NEK3P51956 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 RN7SL366P-201ENST00000577957 292 ntBASIC7.66□□□□□ -1.18
NEK3P51956 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.66□□□□□ -1.18
NEK3P51956 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 FAM27E3-202ENST00000614611 340 ntBASIC7.66□□□□□ -1.18
NEK3P51956 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.66□□□□□ -1.18
NEK3P51956 AC130448.2-201ENST00000624082 374 ntBASIC7.66□□□□□ -1.18
NEK3P51956 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 AP000766.1-201ENST00000561746 4140 ntBASIC7.66□□□□□ -1.18
NEK3P51956 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 AL161891.1-201ENST00000621575 4636 ntBASIC7.66□□□□□ -1.18
NEK3P51956 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 AC007923.2-201ENST00000584218 1591 ntBASIC7.66□□□□□ -1.18
NEK3P51956 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.66□□□□□ -1.18
NEK3P51956 ZNF840P-201ENST00000504759 1996 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms