Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 MIR575-201ENST00000385013 94 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 PHBP1-201ENST00000392260 808 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 OR4F7P-201ENST00000402444 931 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 OR4F1P-201ENST00000405102 938 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 DHFRP5-201ENST00000406944 564 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 U3.31-201ENST00000408113 216 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 BCRP8-201ENST00000412037 255 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 RPL23AP34-201ENST00000423483 410 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 OR4F2P-201ENST00000424047 938 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 C2orf74-202ENST00000426997 879 ntAPPRIS P2 TSL 3 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC099344.1-201ENST00000433548 492 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AL390728.3-201ENST00000452704 270 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AP000547.1-201ENST00000454360 617 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC109454.1-201ENST00000471205 498 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 RN7SL12P-201ENST00000473849 290 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC087385.2-201ENST00000477729 498 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC079768.1-201ENST00000503181 711 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC113398.2-201ENST00000507630 558 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 HSPD1P4-201ENST00000547203 1702 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC138749.2-201ENST00000566048 167 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 RN7SL178P-201ENST00000582930 304 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC073911.1-201ENST00000592296 504 ntTSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC005518.2-201ENST00000603254 282 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC099777.1-201ENST00000603779 1070 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC069222.1-201ENST00000608028 3360 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 PFN1P2-202ENST00000621347 397 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 MAPK10-383ENST00000642032 3390 ntBASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
AMBRA1Q9C0C7 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
AMBRA1Q9C0C7 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 ENO1P4-201ENST00000416471 1785 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 OR9K2-201ENST00000305377 1122 ntBASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.96□□□□□ -1.3
AMBRA1Q9C0C7 MIR498-201ENST00000385134 124 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms