Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL353803.3-201ENST00000444641 335 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 RHEBP1-201ENST00000448647 556 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 NDUFB4P1-201ENST00000462398 381 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 RN7SL751P-201ENST00000473281 284 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AL928654.1-201ENST00000476081 354 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC108120.1-201ENST00000506543 991 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC022296.2-201ENST00000512424 202 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 UBE2CP1-201ENST00000557130 554 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC104072.1-201ENST00000568817 668 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC024614.1-201ENST00000577546 307 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC006116.6-201ENST00000593258 1103 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AL031429.2-201ENST00000602605 649 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AL035417.2-201ENST00000603887 796 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 FRG2MP-201ENST00000613317 856 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AL353684.1-201ENST00000622677 1120 ntBASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP1Q96SZ6 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AP003471.1-202ENST00000319051 1988 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 PPIAP22-201ENST00000358455 498 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 SMC4P1-201ENST00000414479 527 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC073900.1-201ENST00000429766 776 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 RN7SL152P-201ENST00000484176 298 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC010460.2-201ENST00000509054 677 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC134698.1-201ENST00000511619 643 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC068790.1-201ENST00000536166 355 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 ATP5J2P4-201ENST00000538774 267 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 EGLN3P1-201ENST00000541727 720 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC138749.2-201ENST00000566048 167 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AP005901.4-201ENST00000577336 569 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 GTF2IP6-201ENST00000583143 541 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC012640.3-201ENST00000607847 430 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 uc_338.21-201ENST00000622458 147 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AC006963.1-201ENST00000624003 1052 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 FKBP1AP4-201ENST00000631775 336 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 AL355578.1-201ENST00000607405 1328 ntBASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP1Q96SZ6 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
CDK5RAP1Q96SZ6 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDK5RAP1Q96SZ6 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.71□□□□□ -1.17
CDK5RAP1Q96SZ6 PWRN1-212ENST00000569908 1435 ntBASIC7.71□□□□□ -1.17
CDK5RAP1Q96SZ6 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CDK5RAP1Q96SZ6 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CDK5RAP1Q96SZ6 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 AC133552.3-201ENST00000572236 1869 ntBASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.71□□□□□ -1.18
CDK5RAP1Q96SZ6 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms