Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SLC25A5P2-201ENST00000413713 897 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 RPL21P32-201ENST00000419877 477 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 CHCHD2P5-201ENST00000421414 400 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC116050.1-206ENST00000423774 213 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 MOB1AP1-201ENST00000430903 535 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC073614.1-201ENST00000438690 650 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 IFNWP5-201ENST00000445100 588 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC037198.2-201ENST00000478845 733 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 RPS27AP16-201ENST00000492222 470 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC008638.2-201ENST00000503840 715 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC098827.1-201ENST00000514630 667 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 RNA5SP96-201ENST00000516041 107 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC078962.2-201ENST00000541885 712 ntTSL 3 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 LYZ-202ENST00000548839 558 ntTSL 2 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 RN7SL697P-201ENST00000582484 299 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 UBE2V2P2-201ENST00000587677 504 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 OR7D1P-201ENST00000592739 933 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC023206.1-201ENST00000605824 298 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 OR7M1P-201ENST00000608946 533 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC234791.1-201ENST00000620830 1203 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 PARP8-220ENST00000514342 2384 ntTSL 5 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC130464.1-201ENST00000416201 1500 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 TMPPE-201ENST00000342462 3962 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 C15orf53-201ENST00000318792 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC237221.2-201ENST00000624231 2537 ntBASIC9.54□□□□□ -0.88
LRCH3Q96II8 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 AL359682.1-201ENST00000555328 2490 ntTSL 2 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 UGT1A1-202ENST00000360418 3389 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
LRCH3Q96II8 GHR-212ENST00000620156 4529 ntTSL 5 BASIC9.54□□□□□ -0.88
LRCH3Q96II8 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 SEZ6-204ENST00000442608 3805 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 CAMSAP2-203ENST00000413307 4498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 NCF2-203ENST00000413720 2276 ntTSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 IL5RA-210ENST00000456302 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 EYA1-206ENST00000388743 2199 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 MROH5-201ENST00000430863 4164 ntAPPRIS P5 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 JAKMIP2-AS1-201ENST00000626945 1920 ntTSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 ATAD1-201ENST00000308448 4640 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 TMSB4XP4-201ENST00000323496 618 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 Y_RNA.326-201ENST00000365176 113 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 VN2R17P-201ENST00000391712 832 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC133644.1-201ENST00000398171 937 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 DNAJA1P3-201ENST00000399417 1194 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 Z86062.1-201ENST00000406773 777 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC130472.1-201ENST00000427885 309 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 RN7SL141P-201ENST00000484215 266 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC069439.1-201ENST00000494739 167 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 RNU6-314P-201ENST00000516574 104 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC084357.3-202ENST00000543539 679 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 UBE2NP1-201ENST00000545592 458 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC026470.2-201ENST00000561492 181 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC005722.3-201ENST00000580884 446 ntTSL 3 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC093458.1-201ENST00000608912 222 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC103974.2-201ENST00000611319 778 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC9.53□□□□□ -0.88
LRCH3Q96II8 SMG6-IT1-201ENST00000624930 374 ntBASIC9.53□□□□□ -0.88
LRCH3Q96II8 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms