Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 MIR365B-201ENST00000362317 111 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 FANK1-201ENST00000368689 522 ntTSL 3 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RNU6-468P-201ENST00000384003 109 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 TERF1P4-201ENST00000399580 1115 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 TRIM60P5Y-201ENST00000413946 574 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC016877.1-201ENST00000420417 464 ntTSL 3 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC008155.1-201ENST00000421078 329 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 EIF3IP1-201ENST00000433048 967 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AL606490.7-201ENST00000433136 191 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RPL21P88-201ENST00000436649 436 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 ACTP1-201ENST00000440793 383 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 FTH1P27-201ENST00000449509 551 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC004801.2-201ENST00000468202 779 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 SSR3-206ENST00000476217 807 ntTSL 3 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RN7SL333P-201ENST00000476398 297 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 HMGB1P38-201ENST00000490557 577 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AP000563.1-201ENST00000490865 758 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RN7SL464P-201ENST00000492743 297 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RN7SL864P-201ENST00000493457 285 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 OR7E129P-201ENST00000504655 968 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 SNX18P25-201ENST00000510539 758 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC093770.1-201ENST00000511559 571 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 SNORA19.3-201ENST00000516165 130 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 PPP1R1AP1-201ENST00000525622 425 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC006206.2-201ENST00000537192 992 ntTSL 4 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 Z94722.1-201ENST00000604328 474 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AP002802.2-201ENST00000605877 235 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RN7SL82P-201ENST00000611435 237 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC245033.3-201ENST00000617986 224 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RN7SL628P-201ENST00000619139 237 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC078883.4-201ENST00000623218 367 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC026336.5-201ENST00000624455 738 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 AC068733.2-201ENST00000605434 1418 ntBASIC8.02□□□□□ -1.13
PHC3Q8NDX5 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
PHC3Q8NDX5 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 EEF1A1P11-201ENST00000415278 1389 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 CASC19-255ENST00000641733 1385 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 AC009237.3-203ENST00000442128 3551 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 PID1-201ENST00000354069 839 ntTSL 3 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 RN7SKP28-201ENST00000364770 305 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 RNA5SP256-201ENST00000390978 113 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 AL158827.1-201ENST00000416300 391 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 USP9YP24-201ENST00000434374 697 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 OSBPL10-AS1-204ENST00000436598 513 ntTSL 3 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 FABP5P3-201ENST00000437960 408 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 RPS10P3-201ENST00000439253 494 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC8.01□□□□□ -1.13
PHC3Q8NDX5 USP9YP17-201ENST00000444617 696 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 RARRES2P3-201ENST00000457739 473 ntBASIC8.01□□□□□ -1.13
PHC3Q8NDX5 AC008026.1-201ENST00000460492 447 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms