Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AP005597.1-201ENST00000534192 802 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 CHCHD3P2-201ENST00000550751 639 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC133569.1-201ENST00000564327 373 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AC110769.3-201ENST00000624567 1173 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AL359922.2-201ENST00000581788 3017 ntBASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
TRIM48Q8IWZ4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC093616.1-201ENST00000427434 2095 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 HMGB3P1-201ENST00000393368 573 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AL353151.1-201ENST00000402406 604 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 MIR1231-201ENST00000408101 92 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 RN7SKP261-201ENST00000410948 278 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 HMGB3P5-201ENST00000428894 612 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 MTND4LP14-201ENST00000429447 288 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 RPSAP62-201ENST00000432596 833 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC099344.1-201ENST00000433548 492 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AL590682.1-201ENST00000437248 344 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 PCMTD1P3-201ENST00000451824 472 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 RN7SL861P-201ENST00000473793 285 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 RNU6-760P-201ENST00000516078 97 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 OR11J5P-201ENST00000556889 934 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC079148.1-201ENST00000565944 819 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC090415.1-201ENST00000581877 847 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 GLUD1P2-201ENST00000583339 201 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 BOLA2P1-201ENST00000584794 232 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 GLUD1P8-201ENST00000585063 203 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC012488.1-201ENST00000611221 640 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC087683.2-201ENST00000611384 326 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC068234.2-201ENST00000619646 522 ntBASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 AC004862.1-209ENST00000437763 1678 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM48Q8IWZ4 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms