Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.68□□□□□ -1.18
APOEP02649 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.68□□□□□ -1.18
APOEP02649 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.68□□□□□ -1.18
APOEP02649 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
APOEP02649 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
APOEP02649 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.68□□□□□ -1.18
APOEP02649 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
APOEP02649 RNA5SP396-201ENST00000364834 120 ntBASIC7.68□□□□□ -1.18
APOEP02649 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
APOEP02649 ARMCX7P-201ENST00000372828 562 ntBASIC7.68□□□□□ -1.18
APOEP02649 SNORA3.1-201ENST00000408166 111 ntBASIC7.68□□□□□ -1.18
APOEP02649 RN7SKP236-201ENST00000410635 284 ntBASIC7.68□□□□□ -1.18
APOEP02649 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.68□□□□□ -1.18
APOEP02649 RN7SL688P-201ENST00000471754 275 ntBASIC7.68□□□□□ -1.18
APOEP02649 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.68□□□□□ -1.18
APOEP02649 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC7.68□□□□□ -1.18
APOEP02649 HSPE1P10-201ENST00000508631 558 ntBASIC7.68□□□□□ -1.18
APOEP02649 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.68□□□□□ -1.18
APOEP02649 UBE2CP4-201ENST00000561405 535 ntBASIC7.68□□□□□ -1.18
APOEP02649 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.68□□□□□ -1.18
APOEP02649 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC7.68□□□□□ -1.18
APOEP02649 MIR7162-201ENST00000611134 69 ntBASIC7.68□□□□□ -1.18
APOEP02649 MIR6731-201ENST00000614863 72 ntBASIC7.68□□□□□ -1.18
APOEP02649 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.68□□□□□ -1.18
APOEP02649 uc_338.21-201ENST00000622458 147 ntBASIC7.68□□□□□ -1.18
APOEP02649 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.68□□□□□ -1.18
APOEP02649 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
APOEP02649 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
APOEP02649 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.67□□□□□ -1.18
APOEP02649 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
APOEP02649 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
APOEP02649 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
APOEP02649 PPIAP22-201ENST00000358455 498 ntBASIC7.67□□□□□ -1.18
APOEP02649 AL390840.1-201ENST00000420303 988 ntBASIC7.67□□□□□ -1.18
APOEP02649 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
APOEP02649 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.67□□□□□ -1.18
APOEP02649 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
APOEP02649 AC114928.1-201ENST00000446516 415 ntBASIC7.67□□□□□ -1.18
APOEP02649 RN7SL251P-201ENST00000464175 297 ntBASIC7.67□□□□□ -1.18
APOEP02649 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.67□□□□□ -1.18
APOEP02649 AC016559.1-201ENST00000511420 199 ntBASIC7.67□□□□□ -1.18
APOEP02649 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.67□□□□□ -1.18
APOEP02649 AC111000.1-201ENST00000514545 713 ntBASIC7.67□□□□□ -1.18
APOEP02649 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.67□□□□□ -1.18
APOEP02649 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.67□□□□□ -1.18
APOEP02649 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
APOEP02649 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
APOEP02649 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.67□□□□□ -1.18
APOEP02649 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC7.67□□□□□ -1.18
APOEP02649 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.67□□□□□ -1.18
APOEP02649 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
APOEP02649 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
APOEP02649 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
APOEP02649 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
APOEP02649 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
APOEP02649 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.67□□□□□ -1.18
APOEP02649 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.67□□□□□ -1.18
APOEP02649 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.66□□□□□ -1.18
APOEP02649 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 RPL5P5-201ENST00000392009 893 ntBASIC7.66□□□□□ -1.18
APOEP02649 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 RPL12P10-201ENST00000413498 498 ntBASIC7.66□□□□□ -1.18
APOEP02649 AC009413.1-201ENST00000414823 399 ntBASIC7.66□□□□□ -1.18
APOEP02649 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 RPSAP1-201ENST00000421328 880 ntBASIC7.66□□□□□ -1.18
APOEP02649 RPL5P34-201ENST00000426545 891 ntBASIC7.66□□□□□ -1.18
APOEP02649 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 AC105052.2-201ENST00000434317 794 ntBASIC7.66□□□□□ -1.18
APOEP02649 RPL5P27-201ENST00000437011 881 ntBASIC7.66□□□□□ -1.18
APOEP02649 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.66□□□□□ -1.18
APOEP02649 RPL5P9-201ENST00000448118 886 ntBASIC7.66□□□□□ -1.18
APOEP02649 AC234771.3-201ENST00000454984 622 ntBASIC7.66□□□□□ -1.18
APOEP02649 RN7SL180P-201ENST00000466769 294 ntBASIC7.66□□□□□ -1.18
APOEP02649 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 AC087360.1-201ENST00000518788 616 ntBASIC7.66□□□□□ -1.18
APOEP02649 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.66□□□□□ -1.18
APOEP02649 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 OR5F2P-201ENST00000532761 941 ntBASIC7.66□□□□□ -1.18
APOEP02649 EGLN3P1-201ENST00000541727 720 ntBASIC7.66□□□□□ -1.18
APOEP02649 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.66□□□□□ -1.18
APOEP02649 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.66□□□□□ -1.18
APOEP02649 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
APOEP02649 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.66□□□□□ -1.18
APOEP02649 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms