Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX4O60224 AC079944.1-201ENST00000485426 495 ntBASIC6.69□□□□□ -1.34
SSX4O60224 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.69□□□□□ -1.34
SSX4O60224 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.69□□□□□ -1.34
SSX4O60224 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX4O60224 OR4N1P-201ENST00000554847 949 ntBASIC6.69□□□□□ -1.34
SSX4O60224 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX4O60224 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SSX4O60224 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.69□□□□□ -1.34
SSX4O60224 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX4O60224 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC6.69□□□□□ -1.34
SSX4O60224 AL133351.5-201ENST00000612789 106 ntBASIC6.69□□□□□ -1.34
SSX4O60224 AL451054.1-201ENST00000621770 772 ntBASIC6.69□□□□□ -1.34
SSX4O60224 SLC16A1P1-201ENST00000486743 1510 ntBASIC6.69□□□□□ -1.34
SSX4O60224 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SSX4O60224 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
SSX4O60224 XRCC6P3-201ENST00000422187 1621 ntBASIC6.68□□□□□ -1.34
SSX4O60224 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 AC018765.1-201ENST00000623357 3446 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AC062029.1-202ENST00000606164 3651 ntBASIC6.68□□□□□ -1.34
SSX4O60224 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 RPSAP44-201ENST00000406712 884 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 RBMS1P1-201ENST00000417216 1156 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 FABP5P1-201ENST00000423401 411 ntBASIC6.68□□□□□ -1.34
SSX4O60224 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 FABP5P2-201ENST00000439042 408 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX4O60224 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 AL353803.3-201ENST00000444641 335 ntBASIC6.68□□□□□ -1.34
SSX4O60224 ARL2BPP7-201ENST00000446421 490 ntBASIC6.68□□□□□ -1.34
SSX4O60224 KIF3AP1-201ENST00000454055 611 ntBASIC6.68□□□□□ -1.34
SSX4O60224 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX4O60224 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 RN7SL308P-201ENST00000464971 297 ntBASIC6.68□□□□□ -1.34
SSX4O60224 RN7SL228P-201ENST00000470060 303 ntBASIC6.68□□□□□ -1.34
SSX4O60224 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX4O60224 LINC01096-201ENST00000501050 1263 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 SUMO2P17-201ENST00000504438 285 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AC108120.1-201ENST00000506543 991 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 OR7E83P-201ENST00000511021 970 ntBASIC6.68□□□□□ -1.34
SSX4O60224 SUMO2P7-201ENST00000511179 285 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AC111000.1-201ENST00000514545 713 ntBASIC6.68□□□□□ -1.34
SSX4O60224 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 AP001994.1-201ENST00000527539 826 ntBASIC6.68□□□□□ -1.34
SSX4O60224 HNRNPCP8-201ENST00000528764 888 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX4O60224 AC103855.4-201ENST00000533158 265 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 NPIPP1-203ENST00000547107 1071 ntBASIC6.68□□□□□ -1.34
SSX4O60224 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC6.68□□□□□ -1.34
SSX4O60224 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 AC092868.1-201ENST00000557949 802 ntBASIC6.68□□□□□ -1.34
SSX4O60224 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX4O60224 MIR744-201ENST00000578242 98 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
SSX4O60224 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.68□□□□□ -1.34
SSX4O60224 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 AC129492.5-201ENST00000603489 315 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AC013731.1-201ENST00000604340 883 ntBASIC6.68□□□□□ -1.34
SSX4O60224 U1.22-201ENST00000605806 164 ntBASIC6.68□□□□□ -1.34
SSX4O60224 MIR7162-201ENST00000611134 69 ntBASIC6.68□□□□□ -1.34
SSX4O60224 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 AL353898.2-201ENST00000623000 255 ntBASIC6.68□□□□□ -1.34
SSX4O60224 AC110769.3-201ENST00000624567 1173 ntBASIC6.68□□□□□ -1.34
SSX4O60224 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SSX4O60224 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC6.68□□□□□ -1.34
SSX4O60224 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SSX4O60224 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.68□□□□□ -1.34
SSX4O60224 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SSX4O60224 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 HSPA8P11-201ENST00000508840 1898 ntBASIC6.68□□□□□ -1.34
SSX4O60224 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.68□□□□□ -1.34
SSX4O60224 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms