Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 FUNDC2P3-201ENST00000334716 533 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 RNA5SP161-201ENST00000363871 115 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 RNA5SP427-201ENST00000365323 119 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX3Q99909 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SSX3Q99909 LST1-211ENST00000376110 433 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX3Q99909 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSX3Q99909 RNA5SP18-201ENST00000390935 121 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 RNA5SP185-201ENST00000390963 114 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC6.32□□□□□ -1.4
SSX3Q99909 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX3Q99909 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX3Q99909 MED28P8-201ENST00000454831 521 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 RN7SL445P-201ENST00000495609 293 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX3Q99909 USP9YP2-201ENST00000504503 1000 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX3Q99909 USP9YP1-201ENST00000513521 1002 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX3Q99909 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 SERPINA15P-201ENST00000529287 266 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX3Q99909 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC6.32□□□□□ -1.4
SSX3Q99909 BMS1P8-201ENST00000565049 1178 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AC006120.1-201ENST00000579375 546 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX3Q99909 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC6.32□□□□□ -1.4
SSX3Q99909 MARK3P1-201ENST00000604796 643 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AC087623.4-201ENST00000606593 695 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSX3Q99909 AL391903.2-201ENST00000614532 247 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AC005355.2-201ENST00000625064 484 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX3Q99909 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 SLC2A3P2-201ENST00000331747 1480 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 AC120036.2-201ENST00000509729 1474 ntBASIC6.32□□□□□ -1.4
SSX3Q99909 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX3Q99909 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SSX3Q99909 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX3Q99909 IL15-207ENST00000514653 1388 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC6.31□□□□□ -1.4
SSX3Q99909 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 BIN2P2-201ENST00000503900 1303 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 SLC16A1P1-201ENST00000486743 1510 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 PHF6-203ENST00000370800 1150 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 MIR181C-201ENST00000384881 110 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 RPL5P5-201ENST00000392009 893 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 HNRNPCP2-201ENST00000399515 881 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 RN7SKP39-201ENST00000410773 322 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 VN1R33P-201ENST00000411800 887 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 PCBP1-AS1-212ENST00000418308 863 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 AL358942.1-201ENST00000418595 1178 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 GAPDHP46-201ENST00000424043 994 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 RPL5P34-201ENST00000426545 891 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX3Q99909 FDPSP8-201ENST00000438304 1089 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC6.31□□□□□ -1.4
SSX3Q99909 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 AL139135.2-201ENST00000445040 433 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 RPL5P9-201ENST00000448118 886 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 RBMY3AP-201ENST00000449381 1145 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AL451063.1-201ENST00000450164 1133 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 AC002075.1-201ENST00000457396 676 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX3Q99909 RN7SL414P-201ENST00000469545 294 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 RPL7P17-201ENST00000470927 724 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AC084871.2-201ENST00000503355 464 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC6.31□□□□□ -1.4
SSX3Q99909 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 AC137549.1-201ENST00000514243 533 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 CAPSL-204ENST00000514524 656 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 RN7SKP2-201ENST00000517003 319 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX3Q99909 AC090692.1-201ENST00000531569 541 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX3Q99909 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX3Q99909 PSMC1P8-201ENST00000536820 1296 ntBASIC6.31□□□□□ -1.4
SSX3Q99909 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX3Q99909 NPIPP1-203ENST00000547107 1071 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms