Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDK5RAP1Q96SZ6 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AF131215.2-201ENST00000531549 1710 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 ARMCX7P-201ENST00000372828 562 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 SETP10-201ENST00000424368 814 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 ANKRD54P1-201ENST00000433115 471 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC105052.2-201ENST00000434317 794 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 OR52U1P-201ENST00000439752 923 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 RN7SL791P-201ENST00000467868 295 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 RPS14P7-201ENST00000473701 448 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 HESX1-202ENST00000473921 757 ntTSL 5 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC009153.1-201ENST00000485799 496 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 RNU6-467P-201ENST00000517027 110 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 CARD8-214ENST00000520007 614 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC068631.3-201ENST00000538831 225 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 FRG2IP-201ENST00000563581 781 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC020978.7-201ENST00000575953 1187 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 RN7SL14P-201ENST00000579715 298 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 EXOSC3P2-201ENST00000594464 497 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AL158050.2-201ENST00000605336 568 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC100814.1-201ENST00000606963 623 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC063944.3-201ENST00000609969 533 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC016597.2-201ENST00000613256 341 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC007204.1-201ENST00000621794 555 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AC138907.10-201ENST00000623708 983 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 CASC19-208ENST00000641056 1292 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 CASC19-227ENST00000641411 1285 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 MAPK10-347ENST00000641762 2856 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 AL627171.1-201ENST00000618845 1308 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 MAPK10-377ENST00000642006 2752 ntBASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
CDK5RAP1Q96SZ6 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AL031123.3-201ENST00000623345 1837 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 RBM5-AS1-201ENST00000630404 1386 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 RPL34P19-201ENST00000415903 342 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 TAS2R2P-201ENST00000421146 910 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 VDAC2P3-201ENST00000430995 828 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 OR6C71P-201ENST00000432580 913 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AC005040.1-201ENST00000437783 482 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AC008620.1-201ENST00000468453 592 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 CEACAMP3-202ENST00000483806 638 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 AC082651.2-201ENST00000496833 166 ntBASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP1Q96SZ6 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms