Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CTAGE11P-201ENST00000451540 2353 ntBASIC7.73□□□□□ -1.17
NEK3P51956 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NEK3P51956 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC7.72□□□□□ -1.17
NEK3P51956 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NEK3P51956 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NEK3P51956 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NEK3P51956 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NEK3P51956 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NEK3P51956 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC7.72□□□□□ -1.17
NEK3P51956 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NEK3P51956 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC7.72□□□□□ -1.17
NEK3P51956 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.72□□□□□ -1.17
NEK3P51956 MTND4LP21-201ENST00000415303 295 ntBASIC7.72□□□□□ -1.17
NEK3P51956 AC092042.2-201ENST00000417304 331 ntBASIC7.72□□□□□ -1.17
NEK3P51956 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NEK3P51956 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.72□□□□□ -1.17
NEK3P51956 AL445187.1-201ENST00000502685 260 ntBASIC7.72□□□□□ -1.17
NEK3P51956 AC117383.2-201ENST00000514722 322 ntBASIC7.72□□□□□ -1.17
NEK3P51956 AC008677.3-201ENST00000519146 666 ntBASIC7.72□□□□□ -1.17
NEK3P51956 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC7.72□□□□□ -1.17
NEK3P51956 AC078878.1-201ENST00000539832 958 ntBASIC7.72□□□□□ -1.17
NEK3P51956 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
NEK3P51956 AL049874.4-201ENST00000557593 255 ntBASIC7.72□□□□□ -1.17
NEK3P51956 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC7.72□□□□□ -1.17
NEK3P51956 DNM1P31-201ENST00000564149 696 ntBASIC7.72□□□□□ -1.17
NEK3P51956 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.72□□□□□ -1.17
NEK3P51956 PART1_3.1-201ENST00000619680 131 ntBASIC7.72□□□□□ -1.17
NEK3P51956 AC018558.4-201ENST00000622153 281 ntBASIC7.72□□□□□ -1.17
NEK3P51956 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 RPSAP68-201ENST00000625020 438 ntBASIC7.72□□□□□ -1.17
NEK3P51956 AL034408.1-201ENST00000637712 664 ntBASIC7.72□□□□□ -1.17
NEK3P51956 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
NEK3P51956 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 TUBBP10-201ENST00000427668 1301 ntBASIC7.72□□□□□ -1.17
NEK3P51956 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.72□□□□□ -1.17
NEK3P51956 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 AC005614.1-201ENST00000598952 3653 ntBASIC7.72□□□□□ -1.17
NEK3P51956 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
NEK3P51956 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
NEK3P51956 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
NEK3P51956 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
NEK3P51956 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
NEK3P51956 AC126773.4-201ENST00000612545 3043 ntBASIC7.71□□□□□ -1.17
NEK3P51956 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
NEK3P51956 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.71□□□□□ -1.17
NEK3P51956 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
NEK3P51956 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
NEK3P51956 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.71□□□□□ -1.18
NEK3P51956 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 OR7E25P-201ENST00000344844 931 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AL139327.1-201ENST00000382988 348 ntBASIC7.71□□□□□ -1.18
NEK3P51956 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
NEK3P51956 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.71□□□□□ -1.18
NEK3P51956 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AC093107.1-201ENST00000422772 609 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC7.71□□□□□ -1.18
NEK3P51956 AL512637.1-201ENST00000439523 1231 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AC004692.1-201ENST00000455430 424 ntBASIC7.71□□□□□ -1.18
NEK3P51956 MTCYBP14-201ENST00000457471 715 ntBASIC7.71□□□□□ -1.18
NEK3P51956 RN7SL58P-201ENST00000473445 294 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AC079944.1-201ENST00000485426 495 ntBASIC7.71□□□□□ -1.18
NEK3P51956 FTH1P23-201ENST00000492727 550 ntBASIC7.71□□□□□ -1.18
NEK3P51956 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC7.71□□□□□ -1.18
NEK3P51956 AC008629.3-201ENST00000505786 586 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AC108120.1-201ENST00000506543 991 ntBASIC7.71□□□□□ -1.18
NEK3P51956 GAPDHP61-201ENST00000507324 1005 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC7.71□□□□□ -1.18
NEK3P51956 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.71□□□□□ -1.18
NEK3P51956 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.71□□□□□ -1.18
NEK3P51956 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.71□□□□□ -1.18
NEK3P51956 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 NDFIP1P1-201ENST00000543144 525 ntBASIC7.71□□□□□ -1.18
NEK3P51956 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
NEK3P51956 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.71□□□□□ -1.18
NEK3P51956 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC7.71□□□□□ -1.18
NEK3P51956 OR7E94P-202ENST00000601375 790 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AL109936.2-201ENST00000605350 650 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AC092944.2-201ENST00000605443 889 ntBASIC7.71□□□□□ -1.18
NEK3P51956 BNIP3P7-201ENST00000605641 516 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AL512413.1-201ENST00000606489 382 ntBASIC7.71□□□□□ -1.18
NEK3P51956 Z93930.3-201ENST00000607919 749 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AL118556.2-201ENST00000614375 824 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AF117829.2-201ENST00000619538 361 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AL157762.1-201ENST00000619612 415 ntBASIC7.71□□□□□ -1.18
NEK3P51956 AC116631.1-202ENST00000640984 683 ntBASIC7.71□□□□□ -1.18
NEK3P51956 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
NEK3P51956 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms