Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 OR52K3P-202ENST00000641797 1729 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.87□□□□□ -1.15
UBE3AQ05086 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
UBE3AQ05086 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
UBE3AQ05086 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 RN7SKP221-201ENST00000410420 301 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.87□□□□□ -1.15
UBE3AQ05086 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 GAPDHP34-201ENST00000432112 823 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC7.87□□□□□ -1.15
UBE3AQ05086 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.87□□□□□ -1.15
UBE3AQ05086 DNAJA1P6-201ENST00000437347 354 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 GOT2P2-201ENST00000450663 1251 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.87□□□□□ -1.15
UBE3AQ05086 RPSAP48-201ENST00000466509 889 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.87□□□□□ -1.15
UBE3AQ05086 RN7SL790P-201ENST00000474043 298 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 RN7SL741P-201ENST00000482473 289 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 RN7SL775P-201ENST00000498361 336 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 IGLV1-62-201ENST00000518003 441 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 IGKV2-29-201ENST00000521304 372 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 OR4A7P-201ENST00000531463 910 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC7.87□□□□□ -1.15
UBE3AQ05086 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.87□□□□□ -1.15
UBE3AQ05086 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC7.87□□□□□ -1.15
UBE3AQ05086 AC090971.3-201ENST00000557871 1041 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 AC068408.1-201ENST00000577406 1144 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 MIR4437-201ENST00000581331 60 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.87□□□□□ -1.15
UBE3AQ05086 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 AC012629.3-201ENST00000623397 328 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC7.87□□□□□ -1.15
UBE3AQ05086 OR7E161P-202ENST00000641994 1033 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
UBE3AQ05086 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
UBE3AQ05086 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
UBE3AQ05086 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.87□□□□□ -1.15
UBE3AQ05086 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 AL590065.1-201ENST00000603371 4774 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.87□□□□□ -1.15
UBE3AQ05086 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.87□□□□□ -1.15
UBE3AQ05086 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.87□□□□□ -1.15
UBE3AQ05086 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
UBE3AQ05086 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
UBE3AQ05086 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
UBE3AQ05086 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
UBE3AQ05086 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
UBE3AQ05086 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
UBE3AQ05086 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
UBE3AQ05086 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
UBE3AQ05086 AC090774.4-201ENST00000578888 1372 ntBASIC7.86□□□□□ -1.15
UBE3AQ05086 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
UBE3AQ05086 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
UBE3AQ05086 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
UBE3AQ05086 MFSD8-256ENST00000641949 1640 ntBASIC7.86□□□□□ -1.15
UBE3AQ05086 AC018880.1-201ENST00000418898 1319 ntBASIC7.86□□□□□ -1.15
UBE3AQ05086 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
UBE3AQ05086 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
UBE3AQ05086 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
UBE3AQ05086 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
UBE3AQ05086 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
UBE3AQ05086 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
UBE3AQ05086 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.86□□□□□ -1.15
UBE3AQ05086 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC7.86□□□□□ -1.15
UBE3AQ05086 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.86□□□□□ -1.15
UBE3AQ05086 AL691447.1-201ENST00000419456 387 ntBASIC7.86□□□□□ -1.15
UBE3AQ05086 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.86□□□□□ -1.15
UBE3AQ05086 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.86□□□□□ -1.15
UBE3AQ05086 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.86□□□□□ -1.15
UBE3AQ05086 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.86□□□□□ -1.15
UBE3AQ05086 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.86□□□□□ -1.15
UBE3AQ05086 ST13P21-201ENST00000453250 1098 ntBASIC7.86□□□□□ -1.15
UBE3AQ05086 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC7.86□□□□□ -1.15
UBE3AQ05086 AC005550.2-201ENST00000476382 318 ntBASIC7.86□□□□□ -1.15
UBE3AQ05086 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC7.86□□□□□ -1.15
UBE3AQ05086 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.86□□□□□ -1.15
UBE3AQ05086 RN7SL868P-201ENST00000485915 303 ntBASIC7.86□□□□□ -1.15
UBE3AQ05086 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.86□□□□□ -1.15
UBE3AQ05086 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC7.86□□□□□ -1.15
UBE3AQ05086 RNA5SP518-201ENST00000515957 119 ntBASIC7.86□□□□□ -1.15
UBE3AQ05086 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
UBE3AQ05086 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC7.86□□□□□ -1.15
UBE3AQ05086 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.86□□□□□ -1.15
UBE3AQ05086 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.86□□□□□ -1.15
UBE3AQ05086 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.86□□□□□ -1.15
UBE3AQ05086 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms