Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
HLA-DOAP06340 AL512662.1-201ENST00000624850 2251 ntBASIC8.59□□□□□ -1.03
HLA-DOAP06340 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.59□□□□□ -1.04
HLA-DOAP06340 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 RN7SKP85-201ENST00000411349 318 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 RPS20P25-201ENST00000412447 352 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 MEG8-201ENST00000414488 800 ntTSL 3 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 GAPDHP51-201ENST00000426454 1000 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 AC007688.1-201ENST00000475592 759 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 RPS16P9-201ENST00000477220 427 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 RN7SL849P-201ENST00000485236 295 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 RN7SL518P-201ENST00000491887 280 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 AC022296.2-201ENST00000512424 202 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 IGLVI-42-201ENST00000522485 381 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 UBE2CP1-201ENST00000557130 554 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 AC012213.2-201ENST00000562917 4597 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 AC110998.1-201ENST00000519029 2053 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC8.58□□□□□ -1.04
HLA-DOAP06340 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 HSP90AA2P-201ENST00000530115 2196 ntBASIC8.58□□□□□ -1.04
HLA-DOAP06340 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HLA-DOAP06340 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AL512353.3-201ENST00000417517 1326 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC127502.2-201ENST00000602663 2351 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 AP001527.1-201ENST00000566440 1957 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 HCG25-217ENST00000422366 702 ntTSL 3 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 ZBTB8OSP2-201ENST00000423890 504 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC027124.1-201ENST00000440852 466 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 MTND4LP12-201ENST00000448237 295 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 EAF2-202ENST00000451944 960 ntTSL 2 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC008967.1-201ENST00000504843 163 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC096661.1-201ENST00000515870 822 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 RPL10P18-201ENST00000519384 309 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 AP001803.1-201ENST00000525668 147 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 AL109628.1-201ENST00000556877 366 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 EEF1B2P1-201ENST00000567221 672 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 PRR13P5-201ENST00000596581 442 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC090953.1-201ENST00000604305 1092 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC106782.7-201ENST00000624024 418 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC099667.1-201ENST00000624222 469 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 AC133555.5-201ENST00000624430 418 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
HLA-DOAP06340 AL353898.3-201ENST00000624679 1755 ntBASIC8.57□□□□□ -1.04
HLA-DOAP06340 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms