Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 AC026471.5-201ENST00000615068 467 ntBASIC25.66■■□□□ 1.7
USP16Q9Y5T5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
USP16Q9Y5T5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 HLA-G-202ENST00000376815 851 ntBASIC25.65■■□□□ 1.7
USP16Q9Y5T5 HLA-G-203ENST00000376818 1127 ntBASIC25.65■■□□□ 1.7
USP16Q9Y5T5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 CD177P1-201ENST00000606252 935 ntBASIC25.65■■□□□ 1.7
USP16Q9Y5T5 AL031963.3-201ENST00000606441 850 ntBASIC25.65■■□□□ 1.7
USP16Q9Y5T5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
USP16Q9Y5T5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
USP16Q9Y5T5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
USP16Q9Y5T5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
USP16Q9Y5T5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
USP16Q9Y5T5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
USP16Q9Y5T5 AP003071.4-201ENST00000562276 1284 ntBASIC25.64■■□□□ 1.7
USP16Q9Y5T5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.64■■□□□ 1.7
USP16Q9Y5T5 AC133561.5-201ENST00000635547 218 ntBASIC25.64■■□□□ 1.7
USP16Q9Y5T5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
USP16Q9Y5T5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
USP16Q9Y5T5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
USP16Q9Y5T5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC25.64■■□□□ 1.69
USP16Q9Y5T5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
USP16Q9Y5T5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
USP16Q9Y5T5 KRT8P20-201ENST00000423953 1409 ntBASIC25.63■■□□□ 1.69
USP16Q9Y5T5 KRT8P17-201ENST00000453110 1448 ntBASIC25.63■■□□□ 1.69
USP16Q9Y5T5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 FAM197Y1-201ENST00000421178 764 ntBASIC25.63■■□□□ 1.69
USP16Q9Y5T5 FAM210CP-201ENST00000445714 574 ntBASIC25.63■■□□□ 1.69
USP16Q9Y5T5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 AL353708.3-201ENST00000610272 989 ntBASIC25.63■■□□□ 1.69
USP16Q9Y5T5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
USP16Q9Y5T5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
USP16Q9Y5T5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
USP16Q9Y5T5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
USP16Q9Y5T5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
USP16Q9Y5T5 AC006128.1-201ENST00000624704 1661 ntBASIC25.62■■□□□ 1.69
USP16Q9Y5T5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
USP16Q9Y5T5 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.62■■□□□ 1.69
USP16Q9Y5T5 AC012306.2-201ENST00000609350 630 ntBASIC25.62■■□□□ 1.69
USP16Q9Y5T5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
USP16Q9Y5T5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC25.62■■□□□ 1.69
USP16Q9Y5T5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
USP16Q9Y5T5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
USP16Q9Y5T5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
USP16Q9Y5T5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
USP16Q9Y5T5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
USP16Q9Y5T5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.6■■□□□ 1.69
USP16Q9Y5T5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
USP16Q9Y5T5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
USP16Q9Y5T5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms