Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.99■□□□□ 0.95
YIPF1Q9Y548 TSPY15P-201ENST00000457163 923 ntBASIC20.99■□□□□ 0.95
YIPF1Q9Y548 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 REXO1L12P-201ENST00000622156 912 ntBASIC20.99■□□□□ 0.95
YIPF1Q9Y548 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 AC007225.1-201ENST00000566331 1836 ntBASIC20.99■□□□□ 0.95
YIPF1Q9Y548 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
YIPF1Q9Y548 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 ECEL1P3-201ENST00000427961 737 ntBASIC20.98■□□□□ 0.95
YIPF1Q9Y548 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 AC004264.1-201ENST00000608354 794 ntBASIC20.98■□□□□ 0.95
YIPF1Q9Y548 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
YIPF1Q9Y548 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 AC211429.1-201ENST00000415277 523 ntBASIC20.97■□□□□ 0.95
YIPF1Q9Y548 AL353807.1-201ENST00000427475 662 ntBASIC20.97■□□□□ 0.95
YIPF1Q9Y548 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 AL355075.4-201ENST00000554988 638 ntBASIC20.97■□□□□ 0.95
YIPF1Q9Y548 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
YIPF1Q9Y548 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 AC026471.5-201ENST00000615068 467 ntBASIC20.96■□□□□ 0.95
YIPF1Q9Y548 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
YIPF1Q9Y548 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
YIPF1Q9Y548 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.95■□□□□ 0.94
YIPF1Q9Y548 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
YIPF1Q9Y548 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
YIPF1Q9Y548 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
YIPF1Q9Y548 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
YIPF1Q9Y548 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
YIPF1Q9Y548 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.95■□□□□ 0.94
YIPF1Q9Y548 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.95■□□□□ 0.94
YIPF1Q9Y548 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.95■□□□□ 0.94
YIPF1Q9Y548 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.95■□□□□ 0.94
YIPF1Q9Y548 CD177P1-201ENST00000606252 935 ntBASIC20.95■□□□□ 0.94
YIPF1Q9Y548 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms