Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 AC060766.5-201ENST00000590539 871 ntBASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 HLA-B-256ENST00000639848 1089 ntBASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 AC092720.2-201ENST00000602388 1665 ntBASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPH3AQ9Y2J0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 AL157384.1-201ENST00000445995 2473 ntBASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 PNMA6B-201ENST00000538162 1200 ntBASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 AP005212.1-201ENST00000581547 1997 ntBASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 AC092667.1-201ENST00000434301 2586 ntBASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RPH3AQ9Y2J0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 LINC01521-201ENST00000504184 1943 ntBASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 RPS2P52-201ENST00000469610 820 ntBASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 GABARAPL3-202ENST00000624044 1851 ntBASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPH3AQ9Y2J0 DPP3P2-201ENST00000416030 1696 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms