Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CTSFQ9UBX1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 AC124016.1-201ENST00000609552 612 ntBASIC18.86■□□□□ 0.61
CTSFQ9UBX1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.86■□□□□ 0.61
CTSFQ9UBX1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 HLA-G-202ENST00000376815 851 ntBASIC18.85■□□□□ 0.61
CTSFQ9UBX1 HLA-G-203ENST00000376818 1127 ntBASIC18.85■□□□□ 0.61
CTSFQ9UBX1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 AC008550.1-201ENST00000511500 884 ntBASIC18.85■□□□□ 0.61
CTSFQ9UBX1 AL031963.3-201ENST00000606441 850 ntBASIC18.85■□□□□ 0.61
CTSFQ9UBX1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSFQ9UBX1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 KRT8P20-201ENST00000423953 1409 ntBASIC18.84■□□□□ 0.61
CTSFQ9UBX1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 KRASP1-201ENST00000407852 552 ntBASIC18.84■□□□□ 0.61
CTSFQ9UBX1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 RPS2P4-201ENST00000476944 856 ntBASIC18.84■□□□□ 0.61
CTSFQ9UBX1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 AC092720.2-201ENST00000602388 1665 ntBASIC18.84■□□□□ 0.61
CTSFQ9UBX1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CTSFQ9UBX1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.83■□□□□ 0.61
CTSFQ9UBX1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSFQ9UBX1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
CTSFQ9UBX1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.83■□□□□ 0.61
CTSFQ9UBX1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.83■□□□□ 0.6
CTSFQ9UBX1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms