Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21■□□□□ 0.95
DNMT3BQ9UBC3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
DNMT3BQ9UBC3 CD177P1-201ENST00000606252 935 ntBASIC21■□□□□ 0.95
DNMT3BQ9UBC3 AL353708.3-201ENST00000610272 989 ntBASIC21■□□□□ 0.95
DNMT3BQ9UBC3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21■□□□□ 0.95
DNMT3BQ9UBC3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21■□□□□ 0.95
DNMT3BQ9UBC3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
DNMT3BQ9UBC3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21■□□□□ 0.95
DNMT3BQ9UBC3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DNMT3BQ9UBC3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DNMT3BQ9UBC3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
DNMT3BQ9UBC3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21■□□□□ 0.95
DNMT3BQ9UBC3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 FAM197Y1-201ENST00000421178 764 ntBASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 AL355355.2-201ENST00000442321 338 ntBASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 AL121906.2-201ENST00000621597 723 ntBASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNMT3BQ9UBC3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNMT3BQ9UBC3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNMT3BQ9UBC3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNMT3BQ9UBC3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
DNMT3BQ9UBC3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNMT3BQ9UBC3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNMT3BQ9UBC3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
DNMT3BQ9UBC3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.98■□□□□ 0.95
DNMT3BQ9UBC3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.98■□□□□ 0.95
DNMT3BQ9UBC3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.98■□□□□ 0.95
DNMT3BQ9UBC3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 PTBP1P-201ENST00000554374 1601 ntBASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 AL353807.1-201ENST00000427475 662 ntBASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DNMT3BQ9UBC3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 AC073195.1-201ENST00000607241 877 ntBASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DNMT3BQ9UBC3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
DNMT3BQ9UBC3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
DNMT3BQ9UBC3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 RCN1P1-201ENST00000400413 996 ntBASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DNMT3BQ9UBC3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 MMP23A-201ENST00000234610 1017 ntBASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 HLA-G-202ENST00000376815 851 ntBASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 HLA-G-203ENST00000376818 1127 ntBASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.94■□□□□ 0.94
DNMT3BQ9UBC3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms