Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 POM121L13P-201ENST00000422362 380 ntBASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPHK1Q9NYA1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SPHK1Q9NYA1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 KRT17P3-201ENST00000420566 1262 ntBASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 RPS2P52-201ENST00000469610 820 ntBASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.29■□□□□ 0.68
SPHK1Q9NYA1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 AC069544.1-201ENST00000609399 999 ntBASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SPHK1Q9NYA1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 AL391422.3-201ENST00000603791 2761 ntBASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SPHK1Q9NYA1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms