Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 CYP21A1P-202ENST00000354927 1481 ntBASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 AC100791.3-201ENST00000617619 330 ntBASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 MIR6821-201ENST00000617625 74 ntBASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 TMEM179-206ENST00000616017 1645 ntBASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
THUMPD1Q9NXG2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
THUMPD1Q9NXG2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
THUMPD1Q9NXG2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 BX323043.1-201ENST00000641006 1765 ntBASIC18.77■□□□□ 0.6
THUMPD1Q9NXG2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms