Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
LIN7CQ9NUP9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 AC011767.1-201ENST00000617410 1153 ntBASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LIN7CQ9NUP9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 AC004911.1-201ENST00000416316 871 ntBASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 MFSD11-216ENST00000590393 1141 ntBASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.59■□□□□ 0.25
LIN7CQ9NUP9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LIN7CQ9NUP9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.58■□□□□ 0.25
LIN7CQ9NUP9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LIN7CQ9NUP9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
LIN7CQ9NUP9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LIN7CQ9NUP9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
LIN7CQ9NUP9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.58■□□□□ 0.25
LIN7CQ9NUP9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LIN7CQ9NUP9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LIN7CQ9NUP9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 AC243732.1-201ENST00000612648 864 ntBASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 AC010536.3-201ENST00000620306 533 ntBASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.58■□□□□ 0.24
LIN7CQ9NUP9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms