Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.78□□□□□ -0.2
CDC42SE2Q9NRR3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 YBX1P1-201ENST00000445822 960 ntBASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 AC093484.2-201ENST00000580996 2166 ntBASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 AC004854.2-201ENST00000608450 1441 ntBASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 AL356652.1-201ENST00000615962 565 ntBASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CDC42SE2Q9NRR3 AL020996.1-203ENST00000536896 2307 ntBASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 AC087633.2-202ENST00000565166 1439 ntBASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
CDC42SE2Q9NRR3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 KRT19P1-201ENST00000405746 1186 ntBASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 KRT18P14-201ENST00000534205 1250 ntBASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 AP000974.1-201ENST00000623909 2387 ntBASIC13.75□□□□□ -0.21
CDC42SE2Q9NRR3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms