Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 BX119927.1-201ENST00000636596 1552 ntBASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRDM9Q9NQV7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 SMG8-203ENST00000578922 2178 ntBASIC18.91■□□□□ 0.62
PRDM9Q9NQV7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 AL390719.1-204ENST00000412397 1219 ntBASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.9■□□□□ 0.62
PRDM9Q9NQV7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.89■□□□□ 0.62
PRDM9Q9NQV7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.89■□□□□ 0.62
PRDM9Q9NQV7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 AC005829.2-201ENST00000571422 1056 ntBASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 MIR4651-201ENST00000582622 73 ntBASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 AC099778.1-201ENST00000568593 1911 ntBASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.89■□□□□ 0.61
PRDM9Q9NQV7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRDM9Q9NQV7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms