Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 AF186192.3-201ENST00000583427 947 ntBASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 MIR4785-201ENST00000585005 73 ntBASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 AC007375.3-201ENST00000600936 2314 ntBASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC30.36■■■□□ 2.45
PTPN23Q9H3S7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC30.35■■■□□ 2.45
PTPN23Q9H3S7 AC092720.2-201ENST00000602388 1665 ntBASIC30.35■■■□□ 2.45
PTPN23Q9H3S7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PTPN23Q9H3S7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC30.35■■■□□ 2.45
PTPN23Q9H3S7 AL353807.1-201ENST00000427475 662 ntBASIC30.35■■■□□ 2.45
PTPN23Q9H3S7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC30.35■■■□□ 2.45
PTPN23Q9H3S7 AL353708.3-201ENST00000610272 989 ntBASIC30.35■■■□□ 2.45
PTPN23Q9H3S7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
PTPN23Q9H3S7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
PTPN23Q9H3S7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC30.34■■■□□ 2.45
PTPN23Q9H3S7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PTPN23Q9H3S7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC30.34■■■□□ 2.45
PTPN23Q9H3S7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
PTPN23Q9H3S7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC30.34■■■□□ 2.45
PTPN23Q9H3S7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC30.34■■■□□ 2.45
PTPN23Q9H3S7 HTR7P1-201ENST00000538670 1336 ntBASIC30.34■■■□□ 2.45
PTPN23Q9H3S7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
PTPN23Q9H3S7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC30.33■■■□□ 2.45
PTPN23Q9H3S7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 C1QL1P1-201ENST00000568105 661 ntBASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PTPN23Q9H3S7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PTPN23Q9H3S7 TSPY15P-201ENST00000457163 923 ntBASIC30.31■■■□□ 2.44
PTPN23Q9H3S7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC30.31■■■□□ 2.44
PTPN23Q9H3S7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC30.31■■■□□ 2.44
PTPN23Q9H3S7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PTPN23Q9H3S7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PTPN23Q9H3S7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PTPN23Q9H3S7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
PTPN23Q9H3S7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
PTPN23Q9H3S7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 NUDT16P1-203ENST00000513809 620 ntBASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 AP001412.1-201ENST00000608405 714 ntBASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PTPN23Q9H3S7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
PTPN23Q9H3S7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PTPN23Q9H3S7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PTPN23Q9H3S7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PTPN23Q9H3S7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PTPN23Q9H3S7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PTPN23Q9H3S7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PTPN23Q9H3S7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PTPN23Q9H3S7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
PTPN23Q9H3S7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPN23Q9H3S7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPN23Q9H3S7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PTPN23Q9H3S7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPN23Q9H3S7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
PTPN23Q9H3S7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms