Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.73■■□□□ 1.07
CDT1Q9H211 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.73■■□□□ 1.07
CDT1Q9H211 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.73■■□□□ 1.07
CDT1Q9H211 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.73■■□□□ 1.07
CDT1Q9H211 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDT1Q9H211 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDT1Q9H211 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDT1Q9H211 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDT1Q9H211 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
CDT1Q9H211 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDT1Q9H211 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CDT1Q9H211 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CDT1Q9H211 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDT1Q9H211 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDT1Q9H211 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDT1Q9H211 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.72■■□□□ 1.07
CDT1Q9H211 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDT1Q9H211 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.72■■□□□ 1.07
CDT1Q9H211 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDT1Q9H211 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDT1Q9H211 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDT1Q9H211 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.72■■□□□ 1.07
CDT1Q9H211 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.72■■□□□ 1.07
CDT1Q9H211 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
CDT1Q9H211 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CDT1Q9H211 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.72■■□□□ 1.07
CDT1Q9H211 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.72■■□□□ 1.07
CDT1Q9H211 AC124016.1-201ENST00000609552 612 ntBASIC21.72■■□□□ 1.07
CDT1Q9H211 AL121829.2-201ENST00000620908 328 ntBASIC21.72■■□□□ 1.07
CDT1Q9H211 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDT1Q9H211 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDT1Q9H211 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CDT1Q9H211 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDT1Q9H211 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDT1Q9H211 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
CDT1Q9H211 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.71■■□□□ 1.07
CDT1Q9H211 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 AC239809.2-201ENST00000415381 517 ntBASIC21.71■■□□□ 1.07
CDT1Q9H211 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.71■■□□□ 1.07
CDT1Q9H211 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.71■■□□□ 1.07
CDT1Q9H211 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.71■■□□□ 1.07
CDT1Q9H211 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.71■■□□□ 1.07
CDT1Q9H211 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.71■■□□□ 1.07
CDT1Q9H211 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.71■■□□□ 1.07
CDT1Q9H211 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.71■■□□□ 1.07
CDT1Q9H211 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.71■■□□□ 1.07
CDT1Q9H211 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDT1Q9H211 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CDT1Q9H211 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.7■■□□□ 1.06
CDT1Q9H211 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDT1Q9H211 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDT1Q9H211 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDT1Q9H211 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.7■■□□□ 1.06
CDT1Q9H211 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDT1Q9H211 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDT1Q9H211 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDT1Q9H211 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.7■■□□□ 1.06
CDT1Q9H211 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.7■■□□□ 1.06
CDT1Q9H211 AL121906.2-201ENST00000621597 723 ntBASIC21.7■■□□□ 1.06
CDT1Q9H211 FAM197Y4-202ENST00000622692 608 ntBASIC21.7■■□□□ 1.06
CDT1Q9H211 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDT1Q9H211 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDT1Q9H211 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDT1Q9H211 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDT1Q9H211 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDT1Q9H211 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.7■■□□□ 1.06
CDT1Q9H211 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDT1Q9H211 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 AL512408.1-201ENST00000569378 2000 ntBASIC21.69■■□□□ 1.06
CDT1Q9H211 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDT1Q9H211 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.69■■□□□ 1.06
CDT1Q9H211 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDT1Q9H211 KRASP1-201ENST00000407852 552 ntBASIC21.69■■□□□ 1.06
CDT1Q9H211 AC133681.1-201ENST00000465482 601 ntBASIC21.69■■□□□ 1.06
CDT1Q9H211 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.69■■□□□ 1.06
CDT1Q9H211 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.69■■□□□ 1.06
CDT1Q9H211 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.69■■□□□ 1.06
CDT1Q9H211 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.69■■□□□ 1.06
CDT1Q9H211 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CDT1Q9H211 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDT1Q9H211 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDT1Q9H211 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.69■■□□□ 1.06
CDT1Q9H211 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms