Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCM2Q9BSQ5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCM2Q9BSQ5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 UNC93B5-201ENST00000530315 699 ntBASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.69■□□□□ 0.74
CCM2Q9BSQ5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 AC006557.6-201ENST00000623071 864 ntBASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCM2Q9BSQ5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCM2Q9BSQ5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCM2Q9BSQ5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms