Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA3Q99758 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA3Q99758 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.91■■□□□ 1.9
ABCA3Q99758 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC26.91■■□□□ 1.9
ABCA3Q99758 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA3Q99758 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA3Q99758 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA3Q99758 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC26.91■■□□□ 1.9
ABCA3Q99758 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ABCA3Q99758 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
ABCA3Q99758 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.91■■□□□ 1.9
ABCA3Q99758 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.91■■□□□ 1.9
ABCA3Q99758 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.91■■□□□ 1.9
ABCA3Q99758 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC26.9■■□□□ 1.9
ABCA3Q99758 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC26.9■■□□□ 1.9
ABCA3Q99758 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC26.9■■□□□ 1.9
ABCA3Q99758 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
ABCA3Q99758 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA3Q99758 STAC-204ENST00000457375 1366 ntTSL 2 BASIC26.9■■□□□ 1.9
ABCA3Q99758 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA3Q99758 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.9■■□□□ 1.9
ABCA3Q99758 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC26.9■■□□□ 1.9
ABCA3Q99758 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA3Q99758 COPE-203ENST00000351079 907 ntTSL 2 BASIC26.9■■□□□ 1.9
ABCA3Q99758 CALM3-202ENST00000391918 702 ntTSL 2 BASIC26.9■■□□□ 1.9
ABCA3Q99758 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
ABCA3Q99758 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
ABCA3Q99758 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC26.9■■□□□ 1.9
ABCA3Q99758 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC26.9■■□□□ 1.9
ABCA3Q99758 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCA3Q99758 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ABCA3Q99758 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
ABCA3Q99758 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ABCA3Q99758 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ABCA3Q99758 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ABCA3Q99758 SLC25A1P4-201ENST00000567977 778 ntBASIC26.89■■□□□ 1.9
ABCA3Q99758 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC26.89■■□□□ 1.9
ABCA3Q99758 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC26.89■■□□□ 1.9
ABCA3Q99758 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
ABCA3Q99758 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.89■■□□□ 1.89
ABCA3Q99758 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.88■■□□□ 1.89
ABCA3Q99758 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ABCA3Q99758 ANKRD20A18P-201ENST00000359341 492 ntBASIC26.88■■□□□ 1.89
ABCA3Q99758 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ABCA3Q99758 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ABCA3Q99758 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ABCA3Q99758 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ABCA3Q99758 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.88■■□□□ 1.89
ABCA3Q99758 HIST1H2APS4-201ENST00000362070 348 ntBASIC26.87■■□□□ 1.89
ABCA3Q99758 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC26.87■■□□□ 1.89
ABCA3Q99758 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ABCA3Q99758 AC091390.4-202ENST00000476426 537 ntBASIC26.87■■□□□ 1.89
ABCA3Q99758 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
ABCA3Q99758 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC26.87■■□□□ 1.89
ABCA3Q99758 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ABCA3Q99758 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC26.87■■□□□ 1.89
ABCA3Q99758 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ABCA3Q99758 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.87■■□□□ 1.89
ABCA3Q99758 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
ABCA3Q99758 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC26.87■■□□□ 1.89
ABCA3Q99758 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC26.87■■□□□ 1.89
ABCA3Q99758 AC097488.1-201ENST00000507834 756 ntBASIC26.87■■□□□ 1.89
ABCA3Q99758 GRAMD4P8-201ENST00000605465 1115 ntBASIC26.87■■□□□ 1.89
ABCA3Q99758 AC083849.1-201ENST00000615227 514 ntBASIC26.87■■□□□ 1.89
ABCA3Q99758 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ABCA3Q99758 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.86■■□□□ 1.89
ABCA3Q99758 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC26.86■■□□□ 1.89
ABCA3Q99758 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC26.86■■□□□ 1.89
ABCA3Q99758 DBP-204ENST00000599385 709 ntTSL 3 BASIC26.86■■□□□ 1.89
ABCA3Q99758 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC26.86■■□□□ 1.89
ABCA3Q99758 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
ABCA3Q99758 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.86■■□□□ 1.89
ABCA3Q99758 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
ABCA3Q99758 AC096733.2-201ENST00000609937 1394 ntBASIC26.85■■□□□ 1.89
ABCA3Q99758 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC26.85■■□□□ 1.89
ABCA3Q99758 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC26.85■■□□□ 1.89
ABCA3Q99758 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ABCA3Q99758 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ABCA3Q99758 AC242852.2-201ENST00000615738 1807 ntBASIC26.85■■□□□ 1.89
ABCA3Q99758 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ABCA3Q99758 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC26.85■■□□□ 1.89
ABCA3Q99758 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC26.85■■□□□ 1.89
ABCA3Q99758 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ABCA3Q99758 RCC2P6-201ENST00000526625 1557 ntBASIC26.85■■□□□ 1.89
ABCA3Q99758 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
ABCA3Q99758 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC26.85■■□□□ 1.89
ABCA3Q99758 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC26.85■■□□□ 1.89
ABCA3Q99758 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ABCA3Q99758 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ABCA3Q99758 AL359075.1-203ENST00000462729 1002 ntBASIC26.85■■□□□ 1.89
ABCA3Q99758 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC26.85■■□□□ 1.89
ABCA3Q99758 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC26.85■■□□□ 1.89
ABCA3Q99758 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC26.85■■□□□ 1.89
ABCA3Q99758 AL138966.2-201ENST00000621997 464 ntBASIC26.85■■□□□ 1.89
ABCA3Q99758 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
ABCA3Q99758 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC26.84■■□□□ 1.89
ABCA3Q99758 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
ABCA3Q99758 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ABCA3Q99758 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ABCA3Q99758 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms