Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 KRT16P4-201ENST00000453883 522 ntBASIC6.18□□□□□ -1.42
HMCN1Q96RW7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 AL645929.1-201ENST00000420084 975 ntBASIC6.18□□□□□ -1.42
HMCN1Q96RW7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 TPSP2-201ENST00000561760 610 ntBASIC6.18□□□□□ -1.42
HMCN1Q96RW7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 AL136038.4-201ENST00000603606 1261 ntBASIC6.18□□□□□ -1.42
HMCN1Q96RW7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMCN1Q96RW7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AC097488.1-201ENST00000507834 756 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AC011498.5-201ENST00000592027 486 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 GPX1P2-201ENST00000429271 606 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 LINC01311-201ENST00000565162 1445 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 KSR1P1-201ENST00000446298 240 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AP002414.4-201ENST00000589764 1148 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AC243591.1-201ENST00000452967 1364 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AC007663.1-201ENST00000438948 1240 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AC010653.2-201ENST00000623505 997 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AC142381.3-201ENST00000568208 1670 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AC091799.1-201ENST00000422823 811 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 SART3-203ENST00000546611 1184 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC6.17□□□□□ -1.42
HMCN1Q96RW7 AC064862.7-201ENST00000604520 867 ntBASIC6.17□□□□□ -1.42
HMCN1Q96RW7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
HMCN1Q96RW7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms