Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 HTR7P1-201ENST00000538670 1336 ntBASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC46A1Q96NT5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 AL353807.1-201ENST00000427475 662 ntBASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 RN7SL850P-201ENST00000579959 291 ntBASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SLC46A1Q96NT5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 AC005229.4-201ENST00000610085 2198 ntBASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 AC011484.1-201ENST00000377652 1995 ntBASIC19.19■□□□□ 0.66
SLC46A1Q96NT5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 AC121338.2-201ENST00000622535 1744 ntBASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 KRT18P35-201ENST00000510488 1269 ntBASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC46A1Q96NT5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC46A1Q96NT5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 NBPF21P-201ENST00000425093 1451 ntBASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 ARMC10P1-201ENST00000313754 855 ntBASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 FAM197Y1-201ENST00000421178 764 ntBASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC46A1Q96NT5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms