Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX27Q96L92 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX27Q96L92 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SNX27Q96L92 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.65■■□□□ 1.06
SNX27Q96L92 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX27Q96L92 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.65■■□□□ 1.06
SNX27Q96L92 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.65■■□□□ 1.06
SNX27Q96L92 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.65■■□□□ 1.06
SNX27Q96L92 FAM197Y4-202ENST00000622692 608 ntBASIC21.65■■□□□ 1.06
SNX27Q96L92 AL023875.1-201ENST00000640777 796 ntBASIC21.65■■□□□ 1.06
SNX27Q96L92 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX27Q96L92 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX27Q96L92 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX27Q96L92 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX27Q96L92 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX27Q96L92 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNX27Q96L92 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.65■■□□□ 1.06
SNX27Q96L92 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNX27Q96L92 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.64■■□□□ 1.06
SNX27Q96L92 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNX27Q96L92 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
SNX27Q96L92 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SNX27Q96L92 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNX27Q96L92 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNX27Q96L92 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.64■■□□□ 1.05
SNX27Q96L92 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.64■■□□□ 1.05
SNX27Q96L92 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.64■■□□□ 1.05
SNX27Q96L92 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
SNX27Q96L92 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.64■■□□□ 1.05
SNX27Q96L92 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
SNX27Q96L92 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SNX27Q96L92 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.64■■□□□ 1.05
SNX27Q96L92 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNX27Q96L92 AC124016.1-201ENST00000609552 612 ntBASIC21.64■■□□□ 1.05
SNX27Q96L92 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNX27Q96L92 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNX27Q96L92 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNX27Q96L92 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.63■■□□□ 1.05
SNX27Q96L92 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.63■■□□□ 1.05
SNX27Q96L92 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNX27Q96L92 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNX27Q96L92 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNX27Q96L92 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.63■■□□□ 1.05
SNX27Q96L92 AC239809.2-201ENST00000415381 517 ntBASIC21.63■■□□□ 1.05
SNX27Q96L92 UBE2SP1-201ENST00000450587 669 ntBASIC21.63■■□□□ 1.05
SNX27Q96L92 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
SNX27Q96L92 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.63■■□□□ 1.05
SNX27Q96L92 AL121829.2-201ENST00000620908 328 ntBASIC21.63■■□□□ 1.05
SNX27Q96L92 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.63■■□□□ 1.05
SNX27Q96L92 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNX27Q96L92 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.62■■□□□ 1.05
SNX27Q96L92 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SNX27Q96L92 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 AC133681.1-201ENST00000465482 601 ntBASIC21.62■■□□□ 1.05
SNX27Q96L92 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.62■■□□□ 1.05
SNX27Q96L92 MIR4497-201ENST00000583208 89 ntBASIC21.62■■□□□ 1.05
SNX27Q96L92 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.62■■□□□ 1.05
SNX27Q96L92 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.62■■□□□ 1.05
SNX27Q96L92 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNX27Q96L92 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNX27Q96L92 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.61■■□□□ 1.05
SNX27Q96L92 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.61■■□□□ 1.05
SNX27Q96L92 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNX27Q96L92 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SNX27Q96L92 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNX27Q96L92 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNX27Q96L92 ARMC10P1-201ENST00000313754 855 ntBASIC21.61■■□□□ 1.05
SNX27Q96L92 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNX27Q96L92 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.61■■□□□ 1.05
SNX27Q96L92 KRT18P35-201ENST00000510488 1269 ntBASIC21.61■■□□□ 1.05
SNX27Q96L92 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.61■■□□□ 1.05
SNX27Q96L92 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.61■■□□□ 1.05
SNX27Q96L92 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SNX27Q96L92 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.61■■□□□ 1.05
SNX27Q96L92 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNX27Q96L92 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNX27Q96L92 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNX27Q96L92 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNX27Q96L92 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.6■■□□□ 1.05
SNX27Q96L92 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.6■■□□□ 1.05
SNX27Q96L92 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNX27Q96L92 KRASP1-201ENST00000407852 552 ntBASIC21.6■■□□□ 1.05
SNX27Q96L92 TPM4P1-201ENST00000436100 807 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms