Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 BX119927.1-201ENST00000636596 1552 ntBASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ECHDC3Q96DC8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 AC124283.5-201ENST00000624661 1809 ntBASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 AC098590.1-201ENST00000468126 897 ntBASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 RN7SL471P-201ENST00000580476 299 ntBASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 MTDHP1-201ENST00000605323 784 ntBASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 AC092667.1-201ENST00000434301 2586 ntBASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ECHDC3Q96DC8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 KRT16P6-202ENST00000425692 1426 ntBASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 AL157384.1-201ENST00000445995 2473 ntBASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ECHDC3Q96DC8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 AL121829.2-201ENST00000620908 328 ntBASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ECHDC3Q96DC8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 LINC01006-201ENST00000333319 2292 ntBASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.02■□□□□ 0.8
ECHDC3Q96DC8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms