Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
APH1AQ96BI3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
APH1AQ96BI3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.74■□□□□ 0.43
APH1AQ96BI3 AC073314.1-201ENST00000568729 2216 ntBASIC17.74■□□□□ 0.43
APH1AQ96BI3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
APH1AQ96BI3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 FEM1AP1-201ENST00000431297 1995 ntBASIC17.73■□□□□ 0.43
APH1AQ96BI3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 KRT8P17-201ENST00000453110 1448 ntBASIC17.73■□□□□ 0.43
APH1AQ96BI3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
APH1AQ96BI3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
APH1AQ96BI3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
APH1AQ96BI3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.73■□□□□ 0.43
APH1AQ96BI3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
APH1AQ96BI3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
APH1AQ96BI3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.73■□□□□ 0.43
APH1AQ96BI3 AP005212.1-201ENST00000581547 1997 ntBASIC17.73■□□□□ 0.43
APH1AQ96BI3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
APH1AQ96BI3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
APH1AQ96BI3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 SMG8-203ENST00000578922 2178 ntBASIC17.72■□□□□ 0.43
APH1AQ96BI3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 AC008687.6-201ENST00000596318 630 ntBASIC17.72■□□□□ 0.43
APH1AQ96BI3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
APH1AQ96BI3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
APH1AQ96BI3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
APH1AQ96BI3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 ABHD17AP1-201ENST00000358206 933 ntBASIC17.71■□□□□ 0.43
APH1AQ96BI3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.71■□□□□ 0.43
APH1AQ96BI3 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.71■□□□□ 0.43
APH1AQ96BI3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
APH1AQ96BI3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.71■□□□□ 0.43
APH1AQ96BI3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
APH1AQ96BI3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
APH1AQ96BI3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 GABARAPL3-202ENST00000624044 1851 ntBASIC17.7■□□□□ 0.42
APH1AQ96BI3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 KRT17P3-201ENST00000420566 1262 ntBASIC17.7■□□□□ 0.42
APH1AQ96BI3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APH1AQ96BI3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.7■□□□□ 0.42
APH1AQ96BI3 AC008403.3-201ENST00000598924 454 ntBASIC17.7■□□□□ 0.42
APH1AQ96BI3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms