Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN23Q96B33 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN23Q96B33 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN23Q96B33 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN23Q96B33 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN23Q96B33 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN23Q96B33 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.13■□□□□ 0.81
CLDN23Q96B33 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN23Q96B33 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN23Q96B33 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.13■□□□□ 0.81
CLDN23Q96B33 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.13■□□□□ 0.81
CLDN23Q96B33 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.13■□□□□ 0.81
CLDN23Q96B33 FAM87A-204ENST00000613235 858 ntBASIC20.13■□□□□ 0.81
CLDN23Q96B33 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.13■□□□□ 0.81
CLDN23Q96B33 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN23Q96B33 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN23Q96B33 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CLDN23Q96B33 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.12■□□□□ 0.81
CLDN23Q96B33 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 AC011506.1-201ENST00000474329 610 ntBASIC20.12■□□□□ 0.81
CLDN23Q96B33 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN23Q96B33 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.12■□□□□ 0.81
CLDN23Q96B33 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN23Q96B33 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.12■□□□□ 0.81
CLDN23Q96B33 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.12■□□□□ 0.81
CLDN23Q96B33 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CLDN23Q96B33 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLDN23Q96B33 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN23Q96B33 KRT8P20-201ENST00000423953 1409 ntBASIC20.11■□□□□ 0.81
CLDN23Q96B33 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN23Q96B33 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN23Q96B33 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN23Q96B33 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN23Q96B33 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN23Q96B33 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN23Q96B33 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN23Q96B33 AC097488.1-201ENST00000507834 756 ntBASIC20.11■□□□□ 0.81
CLDN23Q96B33 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN23Q96B33 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
CLDN23Q96B33 MYC-208ENST00000641036 567 ntBASIC20.11■□□□□ 0.81
CLDN23Q96B33 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN23Q96B33 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN23Q96B33 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN23Q96B33 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN23Q96B33 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 C9orf163-202ENST00000624034 2573 ntBASIC20.1■□□□□ 0.81
CLDN23Q96B33 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN23Q96B33 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 FAM8A6P-201ENST00000407496 1135 ntBASIC20.1■□□□□ 0.81
CLDN23Q96B33 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN23Q96B33 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN23Q96B33 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CLDN23Q96B33 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN23Q96B33 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN23Q96B33 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN23Q96B33 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
CLDN23Q96B33 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN23Q96B33 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CLDN23Q96B33 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CLDN23Q96B33 AC091390.4-202ENST00000476426 537 ntBASIC20.09■□□□□ 0.81
CLDN23Q96B33 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.09■□□□□ 0.81
CLDN23Q96B33 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.09■□□□□ 0.81
CLDN23Q96B33 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CLDN23Q96B33 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN23Q96B33 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.08■□□□□ 0.81
CLDN23Q96B33 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN23Q96B33 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN23Q96B33 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN23Q96B33 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN23Q96B33 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN23Q96B33 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN23Q96B33 INGX-201ENST00000359239 846 ntBASIC20.08■□□□□ 0.81
CLDN23Q96B33 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms