Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CPNE4Q96A23 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CPNE4Q96A23 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.96■□□□□ 0.47
CPNE4Q96A23 AC026366.1-201ENST00000488803 879 ntBASIC17.96■□□□□ 0.47
CPNE4Q96A23 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.96■□□□□ 0.47
CPNE4Q96A23 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CPNE4Q96A23 UNC93B4-201ENST00000505679 747 ntBASIC17.96■□□□□ 0.47
CPNE4Q96A23 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 SOX15-203ENST00000570788 1093 ntBASIC17.96■□□□□ 0.47
CPNE4Q96A23 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.96■□□□□ 0.47
CPNE4Q96A23 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.96■□□□□ 0.47
CPNE4Q96A23 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.96■□□□□ 0.47
CPNE4Q96A23 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CPNE4Q96A23 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CPNE4Q96A23 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
CPNE4Q96A23 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.96■□□□□ 0.46
CPNE4Q96A23 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
CPNE4Q96A23 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CPNE4Q96A23 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE4Q96A23 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE4Q96A23 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE4Q96A23 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE4Q96A23 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE4Q96A23 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CPNE4Q96A23 ESRRAP1-201ENST00000400596 1257 ntBASIC17.95■□□□□ 0.46
CPNE4Q96A23 FAM201B-201ENST00000458407 597 ntBASIC17.95■□□□□ 0.46
CPNE4Q96A23 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.95■□□□□ 0.46
CPNE4Q96A23 MIR4651-201ENST00000582622 73 ntBASIC17.95■□□□□ 0.46
CPNE4Q96A23 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE4Q96A23 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CPNE4Q96A23 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE4Q96A23 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE4Q96A23 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE4Q96A23 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE4Q96A23 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CPNE4Q96A23 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CPNE4Q96A23 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE4Q96A23 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CPNE4Q96A23 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE4Q96A23 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE4Q96A23 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE4Q96A23 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE4Q96A23 POU5F1P3-201ENST00000428824 1078 ntBASIC17.94■□□□□ 0.46
CPNE4Q96A23 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE4Q96A23 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE4Q96A23 KRT8P17-201ENST00000453110 1448 ntBASIC17.94■□□□□ 0.46
CPNE4Q96A23 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE4Q96A23 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE4Q96A23 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CPNE4Q96A23 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE4Q96A23 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 FEM1AP1-201ENST00000431297 1995 ntBASIC17.93■□□□□ 0.46
CPNE4Q96A23 AP005212.1-201ENST00000581547 1997 ntBASIC17.93■□□□□ 0.46
CPNE4Q96A23 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 AC073314.1-201ENST00000568729 2216 ntBASIC17.93■□□□□ 0.46
CPNE4Q96A23 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 TSPY20P-201ENST00000450910 630 ntBASIC17.93■□□□□ 0.46
CPNE4Q96A23 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 AC008687.6-201ENST00000596318 630 ntBASIC17.93■□□□□ 0.46
CPNE4Q96A23 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE4Q96A23 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE4Q96A23 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms