Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.98■□□□□ 0.47
PTP4A1Q93096 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.98■□□□□ 0.47
PTP4A1Q93096 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.98■□□□□ 0.47
PTP4A1Q93096 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.98■□□□□ 0.47
PTP4A1Q93096 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.98■□□□□ 0.47
PTP4A1Q93096 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTP4A1Q93096 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.97■□□□□ 0.47
PTP4A1Q93096 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PTP4A1Q93096 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.97■□□□□ 0.47
PTP4A1Q93096 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.97■□□□□ 0.47
PTP4A1Q93096 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.97■□□□□ 0.47
PTP4A1Q93096 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 TREX1-205ENST00000625293 1783 ntBASIC17.97■□□□□ 0.47
PTP4A1Q93096 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.97■□□□□ 0.47
PTP4A1Q93096 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.97■□□□□ 0.47
PTP4A1Q93096 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PTP4A1Q93096 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PTP4A1Q93096 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.97■□□□□ 0.47
PTP4A1Q93096 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PTP4A1Q93096 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTP4A1Q93096 AC098818.2-201ENST00000564925 2320 ntBASIC17.97■□□□□ 0.47
PTP4A1Q93096 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PTP4A1Q93096 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
PTP4A1Q93096 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PTP4A1Q93096 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.96■□□□□ 0.47
PTP4A1Q93096 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTP4A1Q93096 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PTP4A1Q93096 KRT18P11-201ENST00000435214 1283 ntBASIC17.96■□□□□ 0.47
PTP4A1Q93096 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTP4A1Q93096 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.96■□□□□ 0.47
PTP4A1Q93096 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTP4A1Q93096 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTP4A1Q93096 UBE2DNL-204ENST00000602536 740 ntBASIC17.96■□□□□ 0.47
PTP4A1Q93096 AL356652.1-201ENST00000615962 565 ntBASIC17.96■□□□□ 0.47
PTP4A1Q93096 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTP4A1Q93096 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTP4A1Q93096 BX323043.1-201ENST00000641006 1765 ntBASIC17.96■□□□□ 0.47
PTP4A1Q93096 AC005332.7-201ENST00000614046 2005 ntBASIC17.96■□□□□ 0.47
PTP4A1Q93096 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.96■□□□□ 0.47
PTP4A1Q93096 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PTP4A1Q93096 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.95■□□□□ 0.46
PTP4A1Q93096 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
PTP4A1Q93096 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.95■□□□□ 0.46
PTP4A1Q93096 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTP4A1Q93096 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 AC137761.2-201ENST00000561729 223 ntBASIC17.95■□□□□ 0.46
PTP4A1Q93096 AC145350.3-201ENST00000569033 163 ntBASIC17.95■□□□□ 0.46
PTP4A1Q93096 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.95■□□□□ 0.46
PTP4A1Q93096 AC093484.2-201ENST00000580996 2166 ntBASIC17.95■□□□□ 0.46
PTP4A1Q93096 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.95■□□□□ 0.46
PTP4A1Q93096 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PTP4A1Q93096 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTP4A1Q93096 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTP4A1Q93096 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PTP4A1Q93096 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTP4A1Q93096 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTP4A1Q93096 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTP4A1Q93096 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.94■□□□□ 0.46
PTP4A1Q93096 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTP4A1Q93096 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PTP4A1Q93096 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTP4A1Q93096 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PTP4A1Q93096 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.94■□□□□ 0.46
PTP4A1Q93096 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.94■□□□□ 0.46
PTP4A1Q93096 AC087633.2-202ENST00000565166 1439 ntBASIC17.94■□□□□ 0.46
PTP4A1Q93096 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTP4A1Q93096 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.94■□□□□ 0.46
PTP4A1Q93096 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms