Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
AP3S1Q92572 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.64■□□□□ 0.41
AP3S1Q92572 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
AP3S1Q92572 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3S1Q92572 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP3S1Q92572 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.64■□□□□ 0.41
AP3S1Q92572 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.63■□□□□ 0.41
AP3S1Q92572 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.63■□□□□ 0.41
AP3S1Q92572 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
AP3S1Q92572 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.63■□□□□ 0.41
AP3S1Q92572 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
AP3S1Q92572 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.63■□□□□ 0.41
AP3S1Q92572 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AP3S1Q92572 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3S1Q92572 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S1Q92572 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S1Q92572 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
AP3S1Q92572 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.62■□□□□ 0.41
AP3S1Q92572 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.62■□□□□ 0.41
AP3S1Q92572 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S1Q92572 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
AP3S1Q92572 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S1Q92572 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S1Q92572 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.62■□□□□ 0.41
AP3S1Q92572 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S1Q92572 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S1Q92572 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
AP3S1Q92572 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
AP3S1Q92572 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S1Q92572 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S1Q92572 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S1Q92572 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AP3S1Q92572 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3S1Q92572 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S1Q92572 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.61■□□□□ 0.41
AP3S1Q92572 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S1Q92572 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S1Q92572 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3S1Q92572 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3S1Q92572 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.61■□□□□ 0.41
AP3S1Q92572 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S1Q92572 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S1Q92572 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
AP3S1Q92572 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
AP3S1Q92572 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.61■□□□□ 0.41
AP3S1Q92572 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
AP3S1Q92572 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
AP3S1Q92572 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
AP3S1Q92572 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.6■□□□□ 0.41
AP3S1Q92572 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
AP3S1Q92572 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.6■□□□□ 0.41
AP3S1Q92572 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3S1Q92572 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3S1Q92572 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
AP3S1Q92572 BX119927.1-201ENST00000636596 1552 ntBASIC17.6■□□□□ 0.41
AP3S1Q92572 SYT6-210ENST00000641643 1587 ntBASIC17.6■□□□□ 0.41
AP3S1Q92572 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.6■□□□□ 0.41
AP3S1Q92572 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms