Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 AC096733.2-201ENST00000609937 1394 ntBASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 AC092865.5-201ENST00000545435 363 ntBASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HMCN2Q8NDA2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 AL121749.1-202ENST00000609313 2153 ntBASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 NUS1P1-201ENST00000446295 882 ntBASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 AL662844.1-201ENST00000546340 181 ntBASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 GCSHP2-201ENST00000560971 527 ntBASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 AC141257.4-201ENST00000634557 245 ntBASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 AC136944.6-201ENST00000634818 245 ntBASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 AF228730.7-201ENST00000641842 219 ntBASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 AC079781.3-201ENST00000449110 356 ntBASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
HMCN2Q8NDA2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 ABCB10P4-201ENST00000566803 2184 ntBASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 AP000692.2-201ENST00000608391 879 ntBASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 AC244107.1-201ENST00000442033 332 ntBASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 MFAP1P1-201ENST00000442257 1255 ntBASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 CCR12P-201ENST00000446203 998 ntBASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 MIR3197-201ENST00000582241 73 ntBASIC11.3□□□□□ -0.6
HMCN2Q8NDA2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 AC087742.1-201ENST00000575880 1738 ntBASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 MIR1233-2-201ENST00000408138 82 ntBASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 MIR1233-1-201ENST00000408722 82 ntBASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.29□□□□□ -0.6
HMCN2Q8NDA2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms