Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM116Q8NCL8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM116Q8NCL8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM116Q8NCL8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM116Q8NCL8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 DPP3P2-201ENST00000416030 1696 ntBASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 KRT18P5-201ENST00000436075 1291 ntBASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 AC007952.6-201ENST00000573168 2673 ntBASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 AC003957.1-201ENST00000625108 2673 ntBASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM116Q8NCL8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 AC137761.2-201ENST00000561729 223 ntBASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 AC145350.3-201ENST00000569033 163 ntBASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TMEM116Q8NCL8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 KRT18P11-201ENST00000435214 1283 ntBASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 UBE2DNL-204ENST00000602536 740 ntBASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TMEM116Q8NCL8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms