Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.06■□□□□ 0.8
PACS2Q86VP3 AC087239.1-201ENST00000622671 572 ntBASIC20.06■□□□□ 0.8
PACS2Q86VP3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PACS2Q86VP3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.06■□□□□ 0.8
PACS2Q86VP3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PACS2Q86VP3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PACS2Q86VP3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.06■□□□□ 0.8
PACS2Q86VP3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.06■□□□□ 0.8
PACS2Q86VP3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PACS2Q86VP3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PACS2Q86VP3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PACS2Q86VP3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PACS2Q86VP3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.05■□□□□ 0.8
PACS2Q86VP3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PACS2Q86VP3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.04■□□□□ 0.8
PACS2Q86VP3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PACS2Q86VP3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
PACS2Q86VP3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 MIR935-201ENST00000401179 91 ntBASIC20.04■□□□□ 0.8
PACS2Q86VP3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.04■□□□□ 0.8
PACS2Q86VP3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.04■□□□□ 0.8
PACS2Q86VP3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS2Q86VP3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS2Q86VP3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.03■□□□□ 0.8
PACS2Q86VP3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS2Q86VP3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PACS2Q86VP3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS2Q86VP3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.03■□□□□ 0.8
PACS2Q86VP3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PACS2Q86VP3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PACS2Q86VP3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
PACS2Q86VP3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PACS2Q86VP3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.03■□□□□ 0.8
PACS2Q86VP3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PACS2Q86VP3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS2Q86VP3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS2Q86VP3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACS2Q86VP3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
PACS2Q86VP3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.03■□□□□ 0.8
PACS2Q86VP3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PACS2Q86VP3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.03■□□□□ 0.8
PACS2Q86VP3 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.03■□□□□ 0.8
PACS2Q86VP3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PACS2Q86VP3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.02■□□□□ 0.8
PACS2Q86VP3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACS2Q86VP3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PACS2Q86VP3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PACS2Q86VP3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.02■□□□□ 0.8
PACS2Q86VP3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACS2Q86VP3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
PACS2Q86VP3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PACS2Q86VP3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACS2Q86VP3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.02■□□□□ 0.8
PACS2Q86VP3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.02■□□□□ 0.79
PACS2Q86VP3 AC009113.1-201ENST00000570267 2443 ntBASIC20.02■□□□□ 0.79
PACS2Q86VP3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PACS2Q86VP3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PACS2Q86VP3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PACS2Q86VP3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.02■□□□□ 0.79
PACS2Q86VP3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.02■□□□□ 0.79
PACS2Q86VP3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.02■□□□□ 0.79
PACS2Q86VP3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms