Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DENND4AQ7Z401 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DENND4AQ7Z401 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
DENND4AQ7Z401 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DENND4AQ7Z401 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.75■□□□□ 0.91
DENND4AQ7Z401 MESTP1-201ENST00000404287 994 ntBASIC20.75■□□□□ 0.91
DENND4AQ7Z401 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.75■□□□□ 0.91
DENND4AQ7Z401 YBX1P10-201ENST00000444752 975 ntBASIC20.75■□□□□ 0.91
DENND4AQ7Z401 MYC-208ENST00000641036 567 ntBASIC20.75■□□□□ 0.91
DENND4AQ7Z401 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DENND4AQ7Z401 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DENND4AQ7Z401 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DENND4AQ7Z401 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 AC010203.1-204ENST00000548782 407 ntBASIC20.74■□□□□ 0.91
DENND4AQ7Z401 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.74■□□□□ 0.91
DENND4AQ7Z401 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
DENND4AQ7Z401 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DENND4AQ7Z401 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
DENND4AQ7Z401 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 AC104076.2-201ENST00000448912 469 ntBASIC20.71■□□□□ 0.91
DENND4AQ7Z401 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DENND4AQ7Z401 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DENND4AQ7Z401 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.7■□□□□ 0.9
DENND4AQ7Z401 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.7■□□□□ 0.9
DENND4AQ7Z401 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms